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Detailed information on CNT30689987

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30369445	Oryza sativa	Oryza glumipatula	40.72	34	99.51	204	forward
CNT3099999	Oryza sativa	Oryza rufipogon	64.47	42.22	100	323	forward

Expression of CNT30689987

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MQRRALHRAHYPRSSGDAAGDGEAEPRDAAAGHAAERRHRAPEAVERRERRRLHHRVLALRRRRRRRLDHRRHRHHLARLLHL*

>peptide 2 (77 aa)
MLLPGMPPNAGTALPKRSNGGNVVGCTTVSLLSAAAAAAALITAATAIILLDFSISSSISLAKAKLSSSVQAAAAADR

Sequence

>CNT30689987
GACCTAATTAAAACAAACAAACACAACCAACCAACAAACAGATAGAATAATCCTCCTCCAAATGCATGTAAAGAAAAGAGATAGAAGAGACACTACTCAT
AATAGAACGCTAGCTAGACACAGTGCAAGCTAACTGCACATATGAAGATATAACGCGCGCGCGTCATATAGCCATCCATATTGCATGCAACGCCGTGCGC
TACATAGAGCACATTACCCGCGCAGCAGCGGCGACGCCGCCGGCGACGGCGAGGCTGAACCCCGGGATGCTGCTGCCGGGCATGCCGCCGAACGCCGGCA
CCGCGCTCCCGAAGCGGTCGAACGGCGGGAACGTCGTCGGCTGCACCACCGTGTCCTTGCTCTCCGCCGCCGCCGCCGCCGCCGCCTTGATCACCGCCGC
CACCGCCATCATCTTGCTCGACTTCTCCATCTCTAGCTCGATCTCTCTTGCAAAAGCTAAGCTAAGCTCGAGTGTGCAAGCTGCTGCTGCTGCTGATCGA
T