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Detailed information on CNT30689984


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30106308Oryza sativaOryza longistaminata44.9860.5397.16457forward
CNT30574687Oryza sativaOryza barthii46.9558.3195.6477forward

Expression of CNT30689984

Peptides detected in this lncRNA

>peptide 1 (37 aa)
EHEDHHIPHPRYMICTVSSSLASLLSLLCPLLCCLVN*

Sequence

>CNT30689984
ATGAACATGAGGACCATCATATCCCTCATCCCAGATACATGATCTGTACTGTCTCCTCCTCTCTAGCTTCTCTCCTCTCCCTGCTGTGCCCCTTGCTTTG
TTGCTTGGTCAATTAGAGCTAAGCAGCAAGCTAGCTTCCTGGAAGCAAGGCCGGCGCCTGGCTGGGACAAGAACCACAGGAACCACAGCTGACTGATTGA
TCAATCAATCAATCTTCTGCTGCCCTGCTGCCTCACAGCCTCAGCAAGACAGTACGTACAGATCAATTTTGGCCCTCTTGAGGCTCCGGCCGGTCGCCGA
CTCGCCGTCGTCGAAGGTGCTCTCCGGCCGGCGGAGTTAACATTGAGCTTGATTTCAAGCCGCGCTCCGATCCGACCGGCAAAGCGCCGAAGCTGCCTTC
CGTTTGTTTCACTCTGGTCTCTGGGGGCTCGCCATCAGCCATCCGTACCGAGCTGTAGGTATGAACAGAGGAGATATCCTGTTCCCTGTATATGCATACT
ATTTCGATACAGTAGTTTTCTCGACATGAGATTTCATGCATGCAGAATTTCACGCTCGAAGTTACCTAATTAGAAGTAATCCATACTCTCGAAACAACCT
ATTTAAGTAGCACTACTATGTAGGAACAGAATAACTGACGTCGTTGCCCGGGCGTGTCAGTTAACAAACGACAAAGATGTGCAACGCACAGCCTGCAAGT
TACATAAGCATCCGCTCGTTCAGTTAAGCTGGCAGATCGACCACACACTAGCTTTGATTTGCGCTAACAGTGTATCAGATCTAACTAGCTCTTGGTGTAA
TAAGATGAACTGTAGAGCGAAGCGGATACGGACAGTGTAATTATGAGGCTCGAGACATCTTCCTCTCCCGTCCCTGTCTGAACATCAATGCCGCTCACCA
GCGCCACTGTTTCTTGATGCTGATTACGGATTTGTAATTCCATCGATCACGCATGCGCGCGCTCTTCTTGTAATTATCTAGAGAGATTAATTGCTCGTCT
TGATCGGTGTCTGATT