Detailed information on CNT30689966


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004168, E-value = 2e-96

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369724Oryza sativaOryza glumipatula62.6380.7389.2176forward

Expression of CNT30689966

Peptides detected in this lncRNA

>peptide 1 (45 aa)
RPREPRIRVKAKTRKTLSKKREMKLRRIPMPTTRREMKTKAPSRS*

>peptide 2 (43 aa)
ETEGAADPGEGQDPQDLEQEAGDEASEDPYAYYQEGDEDEGAQ*

Sequence

>CNT30689966
AGAGACCGAGGGAGCCGCGGATCCGGGTGAAGGCCAAGACCCGCAAGACCTTGAGCAAGAAGCGGGAGATGAAGCTTCGGAGGATCCCTATGCCTACTAC
CAGGAGGGAGATGAAGACGAAGGCGCCCAGTAGGTCTTAGTACGGTCGTTGCCTGTGGCAATGGCATGCCGCTGCTTAAATTCTGCTGCCTTACCTATTT
CTGCTTTTGGATGTATTCCGGACCGCTTGGTCCGATGATTTAAGACTATGCCTGCAGGCTTATGATGTAATAATTCGTACT