Detailed information on CNT30689963


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501297Oryza sativaCoffea canephora5.6928.6784.87119forward
CNT3014214Oryza sativaZea mays5.3624.1989.29112forward
CNT30594890Oryza sativaEragrostis curvula23.6345.1683.4494forward

Expression of CNT30689963

Peptides detected in this lncRNA

>peptide 1 (54 aa)
SSSSEISVSSEEKRQESTSSGRGSSSQKNGLEGSCRPPTSPSSISMTSLIVGRS*

>peptide 2 (51 aa)
MPNAISLSLSQERLLSGEKMNLSRDPWGMYSYTSALLISSAQYPTRRTTLT*

>peptide 3 (46 aa)
THPPLRFQLVQRRNGKNPLAVAGVHHRRRMALKAAADHQHHLQAFL*

>peptide 4 (46 aa)
MDITRQYHSLEHGAIATLAQLVSKMACHCNDVCVGVPCWTKHQLHL*

>peptide 5 (43 aa)
MYYKYVLKFMYECNGTTPETHRIDPIRQSLMCPILLHLCIMGK*

>peptide 6 (38 aa)
MEALSRNQTHKQTKSLCSGNQQERTHYYSLLPVNNSQS*

>peptide 7 (39 aa)
MRNVLEMSTGERIAPLPPLDISCKKSKNSKDENKGLHCGR

>peptide 8 (46 aa)
MTEHRIFVDHLAGGKDEKCSGDVHRRKDSTLAAPRHLLQEEQEQQR*

Sequence

>CNT30689963
ACTCATCCTCCTCTGAGATTTCAGTTAGTTCAGAGGAGAAACGGCAAGAATCCACTAGCAGTGGCAGGGGTTCATCATCGCAGAAGAATGGCCTTGAAGG
CAGCTGCAGACCACCAACATCACCTTCAAGCATTTCTATGACCTCACTCATCGTTGGACGATCATGAGACTTCATTTGAATGCAATGTAGACCAACAACA
CACAACTTCTTTTCCAGCTCATGCATATTGAAGGCATTGGCAATCTCACCCATCTTTTGTTGAACCAGCTGATTATACACCCAAGATGGATAATATGACT
GGCTTGAGCTCGACATGTTCTGCTTAGAATTCCTTCGCCCTCCAGCCATCTCCAACAGAAGCATTCCAAAGCTATAAACATCAGATTTGCTAGATATGAT
ACCAAAGCTCCGAGATATCATCTCAGGAGCAATATAACCTACTGTTCCTCGTGCAGCGCTAACTGGCATAAAACTGTTATCCCGTGGGTACAGTTTGGCA
AGGCCAAAATCGGCAACTTTTGGGACAAAATTGCTATCAAGAAGGATGTTGTGCGGCTTGATATCAAAATGTAGAATCTGCATATCACACCCCTGATGTA
AGTAGTTTATTCCTCTAGCAATGCCCAATGCGATCTCATTGAGCTTGTCCCAAGAGAGACTCTTGTCAGGAGAGAAGATGAACCTGTCAAGAGATCCATG
GGGCATGTACTCATACACAAGTGCACTCCTCATTTCCTCTGCACAATACCCCACTAGACGTACTACATTGACATGATGGATACTGCCAATGGTGGATACC
TCGCTGATGAATTCTTCTCCATTACAATTGTAGTTGGATAGCATTTTGATGGCAACATGGACATCACCAGGCAGTATCACTCCCTTGAACACGGAGCCAT
AGCCACCCTGGCCCAACTTGTCTCTAAAATGGCTTGTCATTGCAATGATGTCTGTGTAGGCGTACCTTGTTGGACCAAGCATCAGCTGCATTTGTAAAAA
CTTCTCAACTGCGTCGATTTTTATTCTAGTTTTCCAATACTTGAAGGCAAGGAAGGTCAATAGTGTCAACGGAGCTATCACGAACCTGCATAAAACTGCA
TAAAAAAACAACTTTACATAAACAGTGATAACTTTTAGTAAATGTGTCTTTAGACATTGGAACGGTGCAGTGGTGATTATGTACTGTATAATTAAGAAGA
CAGAATCATAGAAGTACCAGCAATCCACTTGAAAACAAACAAAGCAAATTGTACAATGAATCCGCCATAAAATTCTATTTTTCCACGAAGCATCCCCATC
ATGTATTACAAATATGTACTCAAATTTATGTATGAATGTAATGGAACAACACCTGAAACTCACCGAATCGACCCCATCAGACAATCCTTGATGTGCCCAA
TCCTACTCCACCTATGTATTATGGGAAAATGAACAGCAAATCCATTCCTCATGGATCTGACGATGTCTGAAAAGCTTGCATTATGTGGCAATGGCGAGTC
CCAACCACCCAAGGGAATCATGGCAAGGTAGCGACATGAAGTCTCAAGGTTTCCGATGATTGGAAAAACAGATGGAGGCATTATCCAGGAACCAAACACA
TAAACAAACGAAGAGCTTGTGCTCAGGCAATCAACAGGAACGTACACACTATTATTCCTTACTGCCTGTGAACAATTCACAAAGCTAACCCATGTAGCTC
CAGGTCCAGGGTCAAGGGCCAGGTCCCAGCCGCCATGTGATCCCTGGATACCCCCCGAAACGAAAGGAAGCTGATCCGAGCGAGGAAGAGGGCAGCTGCT
GTTTGTATCTTTTAGGCTGGCATCCACAACCCAGAAGACAGAAGTAGTGTAGTTGATGCTGGTTACATAGTATGTCCCTGTGTTGATCCTAATGGTAGCC
TTGCTATCTCTGCAGTCTAACTCATATGACGGAACACCGCATCTTTGTGGATCACCTCGCCGGCGGAAAGGATGAGAAATGTTCTGGAGATGTCCACAGG
AGAAAGGATAGCACCCTTGCCGCCCCTCGACATCTCCTGCAAGAAGAGCAAGAACAGCAAAGATGAAAACAAAGGCTTGCATTGTGGTAGA