CANTATAdb - search

Detailed information on CNT30689937

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3099775	Oryza sativa	Oryza rufipogon	32.4	34.59	99.43	174	forward

Expression of CNT30689937

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MDTPTVASSPASSGRHGASAAHTTAPTAAAMPTLTRLRRRATALPRRICTDISESSSVATPPPPSSS*

>peptide 2 (98 aa)
MGEVRTPRRNQLRLSRTTASEEEEEEARDAAHGHAHRGEQPRQQRQARRVRRPHHRPHRRRHAHADQAPPPRHRLAPPHLHGHLGILLRRDAAAALLLL

>peptide 3 (47 aa)
KGLLIRMINQASLGRRKKNKYKVYFSQYILLVVAYGNRRRVQYKGYS*

Sequence

>CNT30689937
TAAGGGCTTGTTAATCCGTATGATTAACCAGGCATCTCTTGGTAGGAGAAAAAAAAACAAATACAAAGTGTATTTTAGTCAGTATATTCTACTAGTAGTA
GCATACGGGAACAGGAGACGTGTACAATACAAGGGGTATAGCTAGCTTGAGAGTGGCGCAGTGGCAGTGAACCAGGCGACGGCCGGGGCGACGAGGCGGG
CGGCGCGCGGGAAGACGGCGTGGGCGGCGCCGGGGAGCATGGGGGAGGTGAGAACGCCGAGGAGGAACCAGTTGAGGCTGAGTAGAACGACGGCGTCGGA
GGAGGAGGAGGAAGAAGCGCGCGACGCTGCACATGGACACGCCCACCGTGGCGAGCAGCCCCGCCAGCAGCGGCAGGCACGGCGCGTCCGCCGCCCACAC
CACCGCCCCCACCGCCGCCGCCATGCCCACGCTGACCAGGCTCCGCCGCCGCGCCACCGCCTTGCCCCGCCGCATCTGCACGGACATCTCGGAATCCTCC
TCCGTCGCGACGCCGCCGCCGCCCTCCTCCTCCTGAG