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Detailed information on CNT30689930

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30595555	Oryza sativa	Oryza meridionalis	60.73	80.7	96.88	481	forward
CNT30107081	Oryza sativa	Oryza longistaminata	26.89	17.49	90.14	213	forward
CNT3099604	Oryza sativa	Oryza rufipogon	100	85.16	99.37	792	forward
CNT30115832	Oryza sativa	Oryza nivara	57.2	100.22	98.45	453	forward

Expression of CNT30689930

Peptides detected in this lncRNA

>peptide 1 (61 aa)
CIRYYRNGLCLPFVAAAPRQSSFSLSPPHHGLNQSPIPCIRCHPLSLLCYIAPQGSSSHLH*

>peptide 2 (44 aa)
AFATTVTVSAFPSLLRRHANLRFPFRRHTTGSISRPSRAYAAIR*

>peptide 3 (29 aa)
MVPLITANQRICTYEVKQKVGRPCCVANE*

>peptide 4 (36 aa)
MNIQSTVSQSPALTGLNLVTKCYGSFNHSQPTDMHI*

Sequence

>CNT30689930
ATGCATTCGCTACTACCGTAACGGTCTCTGCCTTCCCTTCGTTGCTGCGGCGCCACGCCAATCTTCGTTTTCCCTTTCGCCGCCACACCACGGGCTCAAT
CAGTCGCCCATCCCGTGCATACGCTGCCATCCGTTGAGCCTCCTCTGCTACATCGCGCCCCAAGGGTCATCAAGTCACCTCCACTAGCCGTCGTGCGGGG
CAAGCCTTGCTGCCGCACGGCATGGAGTAAGTGGTTTTCCGTCGGAGTCCTTGCTGCTCCGTGATTCTGCCACCAGAGCATTCTCGAGTCCGCATATGAC
AAAAAATGACGGACCAATTCGATCGCAGTTCCTCTTGACAGCGGGTCAGAAAGCGACTGGCCTCTGCTTATTTCAATGAACATACAGAGCACTGTATCAC
AATCGCCTGCACTAACAGGATTAAACTTGGTTACTAAATGTTATGGTTCCTTTAATCACAGCCAACCAACGGATATGCACATATGAGGTGAAACAAAAAG
TCGGCAGACCTTGCTGTGTGGCAAACGAATGAGGTTGTGGGGTCAAGAGAGATGAGCAATCCATATTGCTTGATCCTAATTCGGGCATGATGGTGGAGGC
GGTGAGAAGTTAAGTAGCGTGAAAAGCATAGTTTCTCAAACCTTTGGTTTGAGACTTTTACTTTTATTTTGTATATTGATTCTGATGGCGGATATTTTGC
TGGCTACCTAGCGAAATTCAATTGCCACACATAAACAATGTGTGGGGTTTAATTCCTTTTTTATGTAATAGTTTTAATTTATGTTTTTCAAT