Detailed information on CNT30689817


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-179

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191529Triticum urartuSecale cereale58.4955.3491.96958forward
CNT30242602Triticum urartuAvena sativa56.2380.5893.49921forward
CNT30142111Triticum urartuLolium perenne56.2974.693.82922forward

Expression of CNT30689817

Peptides detected in this lncRNA

>peptide 1 (32 aa)
QQKNRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 2 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

>peptide 3 (62 aa)
MARHLLATTEAEHQVEGGLLLDVVVRQSAAILKLLTSKDQTLLVRWDTLLVLDLRLHIVNGV*

>peptide 4 (63 aa)
AKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 5 (28 aa)
MQLRYIRSQIKHRCNIKRLMSATKSERLS

>peptide 6 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICMPPRKRSTRWRVDSFWML*

>peptide 7 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 8 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 9 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 10 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

Sequence

>CNT30689817
CAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAAC
GCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAG
AGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGT
GCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTG
TCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACT
CCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG
GATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTG
AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCT
GGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGT
CTTGACGAAGATCTGCATGCCACCACGCAAGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGC
TGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCT
CAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAACT
GCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAGTT
TGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACAAT
ATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCCAA
CAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACATAA
AAAGGCTCATGAGCGCCACAAAGTCTGAGCGACTCAGC