Detailed information on CNT30689812


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100520Triticum urartuOryza rufipogon36.1668.7590.32682forward

Expression of CNT30689812

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICMPPRKRSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 3 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 5 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 6 (73 aa)
EGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 7 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 8 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 9 (34 aa)
RRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

>peptide 10 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

Sequence

>CNT30689812
CGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAG
CATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTAC
ACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGAC
TCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCT
GGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCCT
GAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGC
TGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGG
TCTTGACGAAGATCTGCATGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAG
CTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACC
TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGT
AGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC
GTTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAAGCGGAGCACCAGG
TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGC
CCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG
CATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAG
AGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAGTTTGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAG
ACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACAATATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGAC
TCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCCAACAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGT
GCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACATAAAAAGGCTCATGAGCGCCACAAAGTCTGAG