Detailed information on CNT30689811


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30653057Triticum urartuRosa chinensis63.7568.8687.16911forward
CNT30348745Triticum urartuEragrostis tef77.6199.8286.931109forward
CNT30704857Triticum urartuPrunus avium79.8572.2687.471141forward

Expression of CNT30689811

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICMPPRKRSTRWRVDSFWML*

>peptide 3 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 4 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 6 (43 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICI

>peptide 7 (81 aa)
RKQIKCNCEGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 8 (42 aa)
SKADQMQLRRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

Sequence

>CNT30689811
TCGAAAGCAGATCAAATGCAATTGCGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGT
TCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGAC
ACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGG
CGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGT
CTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTT
CACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGC
TTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCCA
AGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC
AGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG
TCAATGGTGTCGGATGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGA
GGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTC
CTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG
CCACCACGCAAGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGA
GGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCC
GGTGAGGGTCTTCACAAAGATCTGCATCT