Detailed information on CNT30689805


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30141342Triticum urartuLolium perenne84.389.2592.981154forward
CNT30217449Triticum urartuKalanchoe fedtschenkoi83.3575.6185.451141forward
CNT30593897Triticum urartuEragrostis curvula66.9881.6690.95917forward

Expression of CNT30689805

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (61 aa)
KQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICMPPRKRSTRWRVDSFWML*

>peptide 6 (43 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICI

>peptide 7 (29 aa)
NRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 8 (62 aa)
MARHLLATTEAEHQVEGGLLLDVVVRQSAAILKLLTSKDQTLLVRWDTLLVLDLRLHIVNGV*

Sequence

>CNT30689805
AAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAGAC
CACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACATA
AGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCA
TCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAG
ACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTG
GATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC
GCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGA
GCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGG
GGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACG
AAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGC
CAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGT
GATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAAGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA
AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGA
TCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT