Detailed information on CNT30689804


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704854Triticum urartuPrunus avium63.7976.7886.341369forward

Expression of CNT30689804

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 2 (81 aa)
RKQIKCNCEGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 3 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 4 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 5 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 6 (42 aa)
SKADQMQLRRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

>peptide 7 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICMPPRKRSTRWRVDSFWML*

>peptide 8 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 9 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTNICMPPLRRSTRWRVDSFWML*

>peptide 10 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 11 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

Sequence

>CNT30689804
TCGAAAGCAGATCAAATGCAATTGCGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGT
TCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGAC
ACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGG
CGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGT
CTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTT
CACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGC
TTACCAGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCGACCTCGA
GCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC
AGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG
TCAATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGA
GGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTC
CTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTAACAAATATCTGCATG
CCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGA
GGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCC
GGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAAGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCG
TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGG
ACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAAT
CATGAAACTGCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGAT
GTTCAAGTTTGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACA
AGATACAATATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTAC
TAGGCCCAACAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGT
GCAACATAAAAAGGCTCATGAGCGCCACAAAGTCTGAGCGACTCAG