Detailed information on CNT30689775


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 9e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603673Triticum urartuOryza punctata49.0869.9788.87692forward

Expression of CNT30689775

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 2 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 3 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 4 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 5 (63 aa)
AKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 6 (32 aa)
QQKNRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 7 (28 aa)
MQLRYIRSQIKHRCNIKRLMSATKSERLS

>peptide 8 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

>peptide 9 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

Sequence

>CNT30689775
CAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAAC
GCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAG
AGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGT
GCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTG
TCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACT
CCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG
GATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTG
AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT
GGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGT
CTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATATGAACCAGA
AGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAGTTTGACCACAAGCTAAAAAGATCAGTTAAT
ATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACAATATCAGTTAAATCAACAGTACTACTGTAA
GCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCCAACAACTAACATAGGAACCAGTTTTGCTAA
AGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACATAAAAAGGCTCATGAGCGCCACAAAGTCTGA
GCGACTCAGC