Detailed information on CNT30689749


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618174Triticum urartuSesamum indicum23.4326.8587.93116forward
CNT3021397Triticum urartuCitrullus lanatus22.8317.0786.73113forward
CNT30228Triticum urartuZea mays34.9523.190.17173forward
CNT30648424Triticum urartuRosa chinensis20.8132.0984.47103forward
CNT30624589Triticum urartuDaucus carota21.4121.3788.68106forward

Expression of CNT30689749

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MPSPTYQWTKARLAYMRSNLWSMREWVDRTLLYGSTTEVETWGDGYTVNPSLDFFP*

>peptide 2 (48 aa)
RYKGLTTQQVVKQTPQSKDSNRQITDKATRADHGIAAARLGKAPGGRL*

Sequence

>CNT30689749
AAAGATACAAGGGTCTTACAACACAACAGGTTGTAAAACAAACACCACAAAGCAAAGATTCAAACAGACAGATAACAGATAAAGCCACTCGGGCAGATCA
TGGGATAGCAGCAGCACGCCTTGGGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCATCCTCACCCTCGTCGAACTCAGCACCAACT
TCTTCATAGTCCTTCTCCAGGGCAGCAAGATCCTCACGGGCCTCAGAGAACTCTCCCTCCTCCATGCCCTCACCCACGTACCAGTGGACGAAGGCACGCT
TGGCGTACATGAGGTCAAACTTGTGGTCAATGAGGGAGTGGGTGGACAGGACACTGTTGTATGGCTCAACAACAGAGGTGGAGACCTGGGGTGATGGGTA
CACTGTGAACCCAAGCTTGGACTTCTTTCCATAGTCAACAGAGAGGCGCTCCAGCAGAAGAGAACCAAGGCACAGATCAACAATCTCCTTGCCAA