Detailed information on CNT30689748


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 2e-39

BLAST vs NONCODE:
NONGMAT000220, E-value = 1e-36

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383546Triticum urartuTriticum turgidum97.05100100296forward
CNT30596030Triticum urartuOryza meridionalis53.7768.3393.29164forward
CNT30726253Triticum urartuLupinus angustifolius53.7745.0588.41164forward

Expression of CNT30689748

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAQQQRRSSRREPRPEPVPPPTALKTRNPWRPVQLSESFLIRSRHRSTISLP

>peptide 2 (72 aa)
LRNKPVEVGVCWALNVKGAAADVIDGLIVKKDRHISVLKEGVGGQDTVVWLNNRGAPAEENQGQSQFHLQQR*

>peptide 3 (60 aa)
MASLSRRIDTSVCSRREWVDRTLLYGSTTEALQQKRTKARASSTSNSVEDKESLETSAVV*

Sequence

>CNT30689748
ACCTGAGAAACAAGCCTGTTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGAAGGATAG
ACACATCAGTGTGCTCAAGGAGGGAGTGGGTGGACAGGACACTGTTGTATGGCTCAACAACAGAGGCGCTCCAGCAGAAGAGAACCAAGGCCAGAGCCAG
TTCCACCTCCAACAGCGTTGAAGACAAGGAATCCCTGGAGACCAGTGCAGTTGTCTGAAAGCTTCCTGATACGGTCAAGGCACAGATCAACAATCTCCTT
GCCAA