Detailed information on CNT30689747


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 7e-43

BLAST vs NONCODE:
NONGMAT000220, E-value = 5e-36

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517675Triticum urartuJuglans regia45.2823.0185.61139forward
CNT3071006Triticum urartuQuercus suber52.4433.3383.85161forward
CNT30283673Triticum urartuTriticum aestivum10099.68100307forward
CNT30220716Triticum urartuHordeum vulgare74.2710095.61228forward
CNT30383371Triticum urartuTriticum turgidum97.39100100299forward
CNT30237104Triticum urartuBrassica oleracea35.1833.3387.04108forward
CNT30435344Triticum urartuAegilops tauschii10098.7198.05307forward
CNT301007Triticum urartuZea mays48.5328.1793.96149forward
CNT30619808Triticum urartuCajanus cajan46.2523.8786.62142forward
CNT3024647Triticum urartuPopulus trichocarpa53.4231.6684.15164forward

Expression of CNT30689747

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MASLSRRIDTSVCSRREWVDRTLLYGSTTERRSSRREPRPEPVPPPTALKTRNPWRPVQLSESFLIRSRHRSTISLP

>peptide 2 (85 aa)
LRNKPVEVGVCWALNVKGAAADVIDGLIVKKDRHISVLKEGVGGQDTVVWLNNREALQQKRTKARASSTSNSVEDKESLETSAVV*

Sequence

>CNT30689747
ACCTGAGAAACAAGCCTGTTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGAAGGATAG
ACACATCAGTGTGCTCAAGGAGGGAGTGGGTGGACAGGACACTGTTGTATGGCTCAACAACAGAGAGGCGCTCCAGCAGAAGAGAACCAAGGCCAGAGCC
AGTTCCACCTCCAACAGCGTTGAAGACAAGGAATCCCTGGAGACCAGTGCAGTTGTCTGAAAGCTTCCTGATACGGTCAAGGCACAGATCAACAATCTCC
TTGCCAA