Detailed information on CNT30689645


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673222Triticum urartuSetaria viridis20.9414.197.7589forward
CNT30375849Triticum urartuArabidopsis thaliana20.947.9588.7689forward
CNT30403349Triticum urartuBeta vulgaris19.0623.2887.6581forward
CNT30300058Triticum urartuTriticum aestivum69.4195.4790.17295forward
CNT30249492Triticum urartuAvena sativa16.2420.2389.8669forward
CNT30136078Triticum urartuLolium perenne20.9434.3692.1389forward
CNT309700Triticum urartuZea mays20.9427.4788.7689forward
CNT30650401Triticum urartuRosa chinensis20.719.9990.9188forward

Expression of CNT30689645

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MVVTSSLQLKGGLCYTSTAYCALASSARICLAASTMLVRAGLTSAYLRFSMVITSASMLMMDWMMSLKLE*

Sequence

>CNT30689645
AAATTTTGTAATTTGAAACATAACGTAACAAACTCAAGACTTAGATGAACAATTCGCCACTCAGTTTACAATACACACCGACAAACCGCCTCAAAAACCA
CCAAATCAAGGGATGAGCACATGGCGCCGAGAAACAAACTAGCCTAGCCAACAAGTGGATACGAGACCCAGATTATTCAAAGTAAACACGACTATGGTGG
TGACATCCTCCTTGCAATTAAAAGGGGGGCTCTGCTATACGAGCACGGCTTACTGCGCCTTGGCGAGCTCGGCACGGATCTGCTTGGCGGCCTCAACCAT
GTTGGTGAGGGCAGGCTTGACCTCGGCGTACTTGCGGTTCTCGATGGTGATCACATCAGCGTCCATGTTGATGATGGACTGGATGATGTCGTTGAAGTTG
GAGTAGCACATGTGGGTGTGGATCT