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Detailed information on CNT30689644


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673277Triticum urartuSetaria viridis9.8863.4489.58144forward
CNT30563287Triticum urartuActinidia chinensis7.3423.0685.05107forward
CNT30721822Triticum urartuTriticum spelta19.8273.1699.65289forward
CNT30323045Triticum urartuAsparagus officinalis8.0924.6384.75118forward

Expression of CNT30689644

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSNGLGRHRAWRWCQWQPSPNPRRCSCHPRKTPGQT*

>peptide 2 (33 aa)
VGVEPLGHLHSRDGGVTPSHREVGAQIDLPTGP*

>peptide 3 (48 aa)
MAVVSVATFSKSSALLLPSQKDSRANLSSLLGPMRGYPTMWDAIFLHK*

Sequence

>CNT30689644
AGTTGGTGTCGAACCACTTGGTCATCTCCATAGCAGGGACGGTGGCGTTACCCCTAGCCATCGAGAAGTAGGTGCTCAAATTGATCTCCCCACCGGTCCA
TGAGTAACGGTCTGGGACGGCACCGAGCATGGCGGTGGTGTCAGTGGCAACCTTCTCCAAATCCTCGGCGCTGCTCTTGCCATCCCAGAAAGACTCCAGG
GCAAACTTGAGCTCCCTCTTGGGGCCCATGCGCGGGTATCCGACAATGTGGGACGCCATCTTTCTGCATAAATAATAGAATTAGAATCAGCTTGATCCAG
CTAAGAGAGTTAGGATCTTGCAACTGAGACTATGGATCTCTATAATTTAAACGTAACCTGAAGAAAACTAACTTACAAAATAAAAAAATTCAGTAACAAT
TTTCTGCAAGCAACTAACTAGAAACATAGTGAACAAACGATAAAACGCATTCATTAAAATTTCTTGGTTCTTGCAGGAAATCTATTAGCATGGACTCATA
CACCTAATTTACTAGTGTCTAAAAGAACAAAAGTAGAAAACTGAACTAAATCAATACAGGTAGGTAGGTTAGGTTAGGTGTACCAACAGCAACCACTACC
ATGTAGACCTCAGGGTTGGTACATAAGTCCTAACAACAATTGGTGGGAGGCAGTGGCAGTGTCCCTCTCACACCAGCAAAGGGTGGGACAGGTGGATCTT
GGACAAATACACAAGTAACGATCAACAAAATTTAGCATGGAGTGCATTCCAAGTTTATAACAGACACTGCATGCATGGACACTAATAGCAGAATTTTCAG
ATCTTTTGAGCTACACGCCAGTACCCATGCACTAACAGTATAAACAAATAAATCTCCAGCGGACTGAATAATAAATCCGAGGAGAAAAACCTCTGGGCTC
AGGGTCAGATCCAGAACCACTGGGCTGGGCACCTAATAAACAGAGCATGGGCCTAAATATAGCGTGGCTAGGTCTCAATCGACCGAGACTTAACTAAGTT
GAGGTCAAGTGACAGAAAAAAAAACTAGTGACATGATATGTAAAAAAAAAATGCACGGATCACCATGTAAGATCCCACGAATATAGCATCGACTGAGACT
TAGCAATCCCAAGAATATAATACTGAATCAAAATTTAACGACGAGAAGCGCCAGATCCCCCAAATCCGAAACCACCAAACGGCCTGGCCATTTCCGTGGT
CGGAGATCGGATCTGAGCGCCCGATCGGCTCAGATCGGACCTCAGCAACGGCACCAGAAAAAACTATTCGCGGAAACGGAGCAGCCCATTCCCGCCCCTG
TTCCTGCAAACAGAGTAGCCGAGCTCTCCGTCCGCGCCGCCTACGCGCGACGCGCCCAGGACACGGGTCCAGGCCGCCAGGACGAGCCCCGCCGGCGGTG
GCCCGGCGATCGATCCTACGACAGATTACCAACATAGATCGTCATTCAAAGCGCGCGG