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Detailed information on CNT30689619


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592637Triticum urartuMusa acuminata4.6521.0291.8974reverse complement
CNT30482060Triticum urartuChara braunii5.7925.6391.392forward

Expression of CNT30689619

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MPARRLGLLPARKKASRTSGRGPDRQKPYPILEPPAELYPARIYLEGGQRNVSTCCQQSFFGILLNGDRP*

>peptide 2 (36 aa)
MWSISRRIMKDRLYPYTNGCFHKEAIEGFPQIEIWS*

>peptide 3 (59 aa)
MQDTAIIRNSRIRNAVIYSFPKLLIPDQPTEMQIGIRNVVNITKNNERPSIPIYKWMFS*

Sequence

>CNT30689619
TTCGATTCGGACTTCGTAGAGCCGGTGCTGCTGCTGTCTGCGTAGGGCCGTCCCCCACTCCCGTCCCGGGGCGCTAAGGGGTTTTGTTTTAGGAACAGAC
GGCGGTGTTTTGCTGACGCCTCGAATCGACGCTTTTGTTGCGACATGCTAAGTTTTCTCCCCTATTGCTAGTAGGTTGATGGGTCGCACGCCCGGCACAC
ATGTTTTGGCCTTGCTTGTGTGTCCATAACTCAAAATAGGTGACCTAACGGCCGCCGCCCGACTAAACATACCAATAGTCACCAAATTCATATGGGCTAC
TGAGGAGTAGGCAATGATCTTCTTAAGATCGATCTGTCTTAAAGTGGTCAAGGAAGTATATATTATAGCAATCGCGCTTAGAGTATAAATGAAAGGAGTG
AAACAAAGTGTCGCTTCGGGAAACATGGGTATTGAAAATCTTAAAAACCTGTAGGTTCCCAATTTTAAATGAATTCCATCCAAGATGACGGATCCAGCCG
TAGGTGCTTCTACATGGGCTTCAGGTAACCAAATATGAACTGGTACGATAGGCACTTTGACGGCAAAAGAGGCAAAAAAAGCAATCCATAGAAGGATTTG
GCGCCGCTCACTAAATTCAGTGGTTAATAAAATTTGTAAATCGGTGGTTCCTATTTGGAGACGAATCAACAGAATAGCTAATAGCATAAAAATGGATCCC
AGTAAAGTATATAGGAAAAACTGATATGCTGCCTTGATCTTTCTTTGTCTCGAACCCCATACCCCTATAATGATGGTAGAGTCAGGGGTGGCCCCAAAGC
GGAATTGACCGGTGGTAGTTGGTCGAAGCTCCAGTGGGTAGCCACTCCCTTCTCAGGGAACCGTACGTGAGACTTCCGCATCATACGGCTCCGTCCCGAG
CTTCCGTCGTCGGCCCTTGTCATTAGACCACTATGCTTGTCTTTTCTGCCTTGACTCTCGAATCTTTGCTTCTCGGGTGGTGGCGAACAATGCTGCTTGC
ATAGCGGGAGATGCCCGCCCGTCGTTTAGGCCTGCTTCCTGCCCGAAAGAAGGCTAGCCGGACTAGTGGTAGGGGACCCGACCGTCAAAAACCCTACCCT
ATTCTCGAACCCCCTGCCGAGCTCTACCCTGCCCGCATTTATTTGGAAGGGGGCCAAAGAAATGTCTCCACCTGCTGCCAACAGTCTTTCTTCGGAATTC
TACTGAACGGGGACCGCCCGTAGGGGGTTTACTGCACAAGGCCCCTGCAGAGGAAAAGCTTGATCCCAGCGAATAGAAGATGCTCAGCTCCGCACAACAT
AGGGATTGGCACGCTTTCGGAAAGAACATAGAATAGTAGAGGATCCAGCATGCAGGACACGGCGATCATTAGAAATTCACGAATTAGAAATGCTGTAATA
TACTCTTTCCCAAAACTTCTCATACCAGACCAACCCACTGAAATGCAAATAGGGATCAGAAATGTGGTCAATATCACGAAGAATAATGAAAGACCGTCTA
TACCCATATACAAATGGATGTTTTCATAAGGAAGCCATTGAAGGCTTTCCACAAATTGAGATTTGGTCGTAGAAGGATCGAATTGTATCC