Detailed information on CNT30689516


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193477Triticum urartuSecale cereale4.8732.9487.9583reverse complement
CNT30553919Triticum urartuOryza glaberrima8.5624.582.88146reverse complement
CNT30241489Triticum urartuAvena sativa7.8520.482.84134forward
CNT3010581Triticum urartuZea mays8.4420.0381.25144reverse complement
CNT30101726Triticum urartuOryza rufipogon9.3227.8582.39159reverse complement
CNT30576293Triticum urartuOryza barthii8.5627.9782.88146reverse complement

Expression of CNT30689516

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MAGFGSLAPKTKNVVVAGGLTGFVFGVYYYTMWAVGSTDELQVTIDKFEDLKKEAAASAAAASASTPGSS*

>peptide 2 (87 aa)
PSPPALPCRRRRRRQPSPPAAAFTLRFVCPPVSSSNLVVVVVDGRVWQPGAQDEERGGGGRADGVRLRGVLLHHVGGRQHRRAAGHH*

>peptide 3 (62 aa)
SFSSCPALPPSPSPSAVAPRRRLHAPIRLPTSQQQQLSRRCRRWQGLAAWRPRRRTWWWRAG*

>peptide 4 (37 aa)
FLLLLPCPAAVAVAVSRRPPPPPSRSDSSAHQSAAAT*

>peptide 5 (30 aa)
MVPGYICTLYGDLFLIVKQKVKIVKKLFLE*

>peptide 6 (69 aa)
MAGFGSLAPKTKNVVVAGGLTGFVFGVYYNTMWAVGSTDELQVTIDKFEDLKKEAAASTAASASTPGSS*

>peptide 7 (47 aa)
MLTSQRKRQNLFAIIGHYSRYFDRKFVFFEKKSKGYFFCGFCFSRVQ*

Sequence

>CNT30689516
TTCCTTCTCCTCCTGCCCTGCCCTGCCGCCGTCGCCGTCGCCGTCAGCCGTCGCCCCCCGCCGCCGCCTTCACGCTCCGATTCGTCTGCCCACCAGTCAG
CAGCAGCAACTTAGTCGTCGTTGTCGTCGATGGCAGGGTTTGGCAGCCTGGCGCCCAAGACGAAGAACGTGGTGGTGGCGGGCGGGCTGACGGGGTTCGT
CTTCGGGGTGTACTACTACACCATGTGGGCGGTAGGCAGCACCGACGAGCTGCAGGTCACCATTGACAAGTTTGAGGACCTGAAGAAGGAGGCAGCCGCC
TCCGCCGCTGCCGCAAGCGCCTCAACCCCGGGATCCTCATAAACAAATGCGCCCTTAACTTTGAAACTAGCTGCTGCCTCTGAACCTGCCCAGGACCATG
GGTTTGGTTTGTATTGATAATAATAATGGGTGCTTTTAGAGGAAATACCCAATGGTTCCTGGGTACATATGTACCCTATATGGGGATTTATTTTTAATAG
TTAAACAAAAAGTCAAAATAGTTAAGAAACTATTTTTAGAATAAAGTTGACTTACTTACGCACTAGTATACATAATTTTCACAAAAAAGAAAAAGATGTT
GACTTCACAACGAAAAAGACAAAATTTATTTGCTATTATAGGTCACTATTCACGCTATTTTGACCGGAAATTTGTCTTTTTTGAAAAGAAGTCAAAAGGA
TATTTTTTTTGTGGATTTTGTTTTTCACGAGTACAATAGAAGGTCAAGTTTATTTCAAAAATATTTTCAGGAATTTTTGACTTTTTGTTGAATTACTAAT
TTTTTTCCCATATAGGGTGCATATGTCCCCATAGACCAAAAGTTCCCCTCCGTGCTTTTAGTTAGATGCAGCATTTTCATTCATGGCATGGATGGAGTTT
GGAGTTGATGATGCTTTTTGTTTGTGAATGGTAGCCGCGGTTTATGATATGATGATACAGGCTCCGCTTCAAAATATAAGGCGTAATGTTTCTGCCCCTC
AGAAATAAATCAGGCTTTTCGATGTTTGACCTTTATTAGTTTTGCAATGGAGAGAGCAGTGCCTTTTGTAGGCAGGGTCCTCTGGTTTGTTGTCGCTGCG
TGTTAACTTTTCTCTCAGTTGTGAGAGGACCATTTTTTGTGTTTCGCACCTTGGATTGGTAACTACATGTAACATTTTCCACATTTTTGTCCTGCAGCAG
CAGCAACCTAGTCGTCTTCGTCGTCAATGGCAGGGTTTGGCAGCCTGGCGCCCAAGACGAAGAACGTGGTGGTGGCGGGCGGGCTGACTGGGTTCGTCTT
TGGGGTGTACTACAACACCATGTGGGCAGTGGGCAGCACCGACGAGCTGCAGGTCACCATCGACAAGTTTGAGGACCTGAAGAAGGAGGCGGCCGCCTCC
ACCGCCGCAAGCGCCTCCACCCCGGGATCCTCCTAAACAGGCGCGCCCTTAACTTTGAAACTAGCTACTACTGCCTCTGAACCTGCCCAGGACCATGGGT
TTGGTTTGTATTGATAATAATGGGTGCTTTTAGTTAGATGCAGCATTTTCATTCATGGCATGGATGGCGTTTGGAGTTGATGATGCTTTTTGTTTGTGAA
TGGTAGCCGCGGTTTATGATATGATGATACAGGCTCCGCTTCGAAATATAAGGCGTAATGTTTCTGCCCCTCAGAAATAAATCAGGCTTTTCGATGTTTG
ACCTTT