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Detailed information on CNT30689350


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373827Triticum urartuArabidopsis thaliana34.3852.5495.91538forward
CNT30201983Triticum urartuPisum sativum26.0129.6694.59407forward
CNT30708145Triticum urartuGlycine max18.0298.9590.78282forward
CNT3091836Triticum urartuSolanum tuberosum26.0114.2995.82407forward
CNT30224045Triticum urartuHordeum vulgare22.1193.0199.71346forward
CNT30439245Triticum urartuAegilops tauschii7.2241.2499.12113forward
CNT30666432Triticum urartuTriticum dicoccoides23.1310097.51362forward
CNT30463939Triticum urartuSaccharum spontaneum66.7181.1897.611044forward
CNT30655387Triticum urartuRosa chinensis24.1555.3496.03378reverse complement
CNT30483162Triticum urartuChara braunii11.8885.3281.72186forward
CNT30418817Triticum urartuPapaver somniferum6.9651.4295.41109reverse complement
CNT30103440Triticum urartuOryza rufipogon79.2376.5499.111240forward
CNT30556528Triticum urartuPanicum hallii37.757.0698.81590forward

Expression of CNT30689350

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MSKMKVALMIKISGETAKKRLNMWFRVSITSSTFISSVFQIAELIQKPRCYY*

>peptide 2 (66 aa)
MNSEASNLSFSKKSKHIEMVPAVLNNRRIWQKYVKLSLLKKLFQNKWAIVRRGAPAASRSKARNTK*

>peptide 3 (41 aa)
FWGKAGGPFGVLILSTGRPSSFGRSGRGGFRLPARRWSKFL*

>peptide 4 (33 aa)
MHLRSNILSRLPWKIQTFFLMLRSHKNINFEAQ*

Sequence

>CNT30689350
TTTTGGGGGAAAGCTGGTGGCCCTTTTGGCGTGTTAATTCTTTCGACGGGGCGGCCTTCTTCGTTCGGTAGATCCGGTCGAGGTGGTTTTCGTTTACCAG
CGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACATATTTTCTTAATGTATTAAAGAGGGCCTCTCTAACCGGTGAAAAGTGG
TAGGTGTCCACTAACGGCTATTCCTGGCTCGGCTCCGATAACGCAATTCCGGGAGGAGTCGGTAGTTGGGCACTGGATCCCTTCGGACCTGGAGAACGTG
TGACACTGGGTCGGGGTTTGGTGAACCAACAGGTCGCTCCTTTAGTTGAAGTATCGGGCCCCTTTTTCGTTGCCTAGGTTACACCTTCGGAATACCCCAG
ACGGGGATTTCGCTCTATTCCCCCCAATCTTCACTTTACGCCACGCCGACTCTCCGTCGTGGAATTAGACCAAGGGTCGAAGACCCATACCATAGGACCC
CGTCTCCCGTATCTTATCTTTCGCGCGTAGGAGATCGAGACACAGCCTTAGGGCTATGGGGAAAGTGGATCGATTGCCCTAGAATTACAACTACGTAGAG
GGTCTCTACAAGTCTATAAATAAGTTCCAAAAAATTGATCGGTAGTAGTCCGGTCGCACCCGAACAATAATATTCCAGAGGGAAATGCACCTAAGATCAA
ATATTTTGAGCCGGCTTCCGTGGAAAATTCAGACTTTCTTTTTGATGCTGCGATCACATAAAAACATAAACTTTGAAGCTCAATAGCTAAATACATGGCA
ATTAAATCATGAGCCGGGATCATTAAGAGCATACTGCGAGTAGGAAGTGGAATTAATACAATGAATTCAGAAGCATCAAACCTCTCTTTTTCGAAAAAAT
CGAAACACATCGAAATGGTACCAGCCGTACTTAATAATAGAAGGATTTGGCAGAAATATGTAAAATTGTCCCTCCTAAAAAAATTATTCCAGAATAAATG
GGCAATAGTTAGGAGAGGTGCGCCAGCGGCGAGCAGAAGCAAGGCGCGCAACACTAAGTAATCCAAGCCAACCCACATTACTAACTAACGGTGGATAATC
ATCTTTCTTAGAGGTACTAAATACAACTCCATGAATGAGCAAAATGAAGGTTGCGTTAATGATAAAGATCTCTGGGGAAACCGCTAAAAAAAGATTGAAC
ATGTGGTTCCGAGTTTCGATAACTTCTTCTACTTTCATTTCCTCCGTCTTCCAAATCGCAGAGTTAATTCAAAAGCCTAGGTGTTATTACTGAGCTGCTG
CTCTTTTTTCTCTAATTCCCTTCTCAGATCCTCCGACTACTCCTCCTTATCCTACTCACTCGAAGTTTCGTTGGTCATTTATTGTTTTTTTAGCCTCTTT
GACAAAGTTAGTAAGAAGAAAAACCTCGATCTTCAGTACACTTCACACCCACACAATCTCTATTTGAAACTAACACTCCATTTCCAGATAGCGAGCGATC
GCTCAGCAATGATACCGCGCCGGACGAAGTACCTATCCTCGGGGACCACGCTTTTTTACTTGTTT