Detailed information on CNT30689164


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-74

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192776Triticum urartuSecale cereale86.8671.1691.19681forward
CNT30305431Triticum urartuTriticum aestivum100.3868.3897.71787forward
CNT30399039Triticum urartuTriticum turgidum100.3898.0197.2787forward
CNT30239807Triticum urartuAvena sativa60.0855.9494.69471forward
CNT30669573Triticum urartuTriticum dicoccoides92.674.0192.01726forward
CNT30576670Triticum urartuOryza barthii59.5755.7992.72467forward
CNT30583294Triticum urartuEchinochloa crusgalli59.6924.5991.88468forward

Expression of CNT30689164

Peptides detected in this lncRNA

>peptide 1 (64 aa)
KYHIVELTNARYNIHMNRDEMHQIEANKRKHRITRSCRHNSGLTYLSSSPKLFTTAAILENNRT*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICMPPRSLSTRWRVDSFWML*

>peptide 3 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKICI

Sequence

>CNT30689164
AAGTACCATATAGTCGAACTAACAAATGCAAGGTACAATATTCATATGAATAGAGATGAAATGCATCAGATAGAAGCAAACAAAAGAAAACACAGGATAA
CTCGCAGCTGCAGACACAATTCAGGGCTCACTTATTTATCAAGTTCACCAAAGCTGTTCACAACAGCAGCAATTCTCGAAAACAACCGAACATAACGATG
CATCACACTGCGATAGAAACATAGAAACGACCAGGACGACAGACACAGGCACCATTGGAGGACATATCAAAGACACAAGACCTGTGAACCCACAGAGAAG
CCGCTCCATTGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATC
CTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGAC
TCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGA
TGTTGTAGTCAGCAAGGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATTTTGG
CCTTGACATTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT