« Back to Triticum urartu search


Detailed information on CNT30689147


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002454, E-value = 1e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30434643Triticum urartuPapaver somniferum56.8101.0892.02752forward

Expression of CNT30689147

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSNEKSCEKHDRLPSEGFLRSVNLHRVNRSLRNPRKGCRPMGTRK*

>peptide 2 (38 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSLK*

>peptide 3 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

Sequence

>CNT30689147
TGAACCACAAAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTT
GAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATA
TAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCC
AGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACGGGCCTTGGAGGACCGAACC
CACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGC
GTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCC
TTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCATACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGG
AAGTGGTCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATG
TCTCAGGGCTCAAGTGATTCACTGAAGTGACGAGACCTTGAAAGCAACTTTTTCAAGTGTCAGTAGCGGGACGTTCTATCAATCGGGGAAGGTTTTTGGT
GACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGACTGCCATCGGAAGGCTTTCTGCGTTCA
GTCAATCTACACAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTAAACCA
TGCTTGGATCGTCGAAGTGAATTGGATGATCGGGCTGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGAC
GTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCATCTTTGGCGACCAGCAAACGGAGGGAT
AAAACCTGTAGTTTTGAAGCAAGG