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Detailed information on CNT30689140


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002454, E-value = 9e-167

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30242955Triticum urartuAvena sativa45.1549.8499.14465forward

Expression of CNT30689140

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDS

>peptide 2 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

Sequence

>CNT30689140
AAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCT
CTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTT
TCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGAAAGGGGGACCACCCTCTAAGCCTAAGTATTC
CTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAACCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGT
CGAAGGAGAGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGG
CGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACGGGCCTTGGAGG
ACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTC
AGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGC
CGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCATACGCTAAGGTCCCTAAGCAATCACTTAGT
GGAAAAGGAAGTGGTCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCAC
CGAAAATGTCTCAGGGCTCAAGTGATTCAC