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Detailed information on CNT30689137


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002454, E-value = 1e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619000Triticum urartuSesamum indicum73.3228.8794.1882forward
CNT30730481Triticum urartuCorchorus capsularis82.4680.6595.26992reverse complement
CNT30505430Triticum urartuNicotiana attenuata73.437.6296.38883forward
CNT30221603Triticum urartuHordeum vulgare86.0385.8997.781035forward
CNT30543268Triticum urartuBrassica napus86.0345.195.071035forward
CNT30435868Triticum urartuAegilops tauschii83.1371.7498.51000forward
CNT3017954Triticum urartuZea mays86.4527.4598.081040forward
CNT30207637Triticum urartuHelianthus annuus73.445.1495.47883forward
CNT30360996Triticum urartuLactuca sativa73.460.5296.49883forward
CNT3057903Triticum urartuAmborella trichopoda86.743.5391.081043reverse complement
CNT30108930Triticum urartuOryza longistaminata84.7943.5998.631020forward
CNT3038420Triticum urartuCucumis melo56.1947.3496.45676forward
CNT30499372Triticum urartuDigitaria exilis86.0330.4598.651035forward

Expression of CNT30689137

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 2 (45 aa)
MSNEKSCEKHDRLPSEGFLRSVNLHRVNRSLRNPRKGCRPMGTRK*

>peptide 3 (38 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSLK*

Sequence

>CNT30689137
AAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCT
CTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGGGGACCACCCTCTAAGCCTAAGTATTC
CTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAACCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGT
CGAAGGAGAGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGG
CGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACGGGCCTTGGAGG
ACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTC
AGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGC
CGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCATACGCTAAGGTCCCTAAGCAATCACTTAGT
GGAAAAGGAAGTGGTCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCAC
CGAAAATGTCTCAGGGCTCAAGTGATTCACTGAAGTGACGAGACCTTGAAAGCAACTTTTTCAAGTGTCAGTAGCGGGACGTTCTATCAATCGGGGAAGG
TTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGACTGCCATCGGAAGGCTTTC
TGCGTTCAGTCAATCTACACAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTA
CTA