CANTATAdb - search

Detailed information on CNT30689133

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002454, E-value = 9e-167

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30592527	Triticum urartu	Musa acuminata	17.85	56.59	98.41	189	forward

Expression of CNT30689133

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSLK*

>peptide 2 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 3 (45 aa)
MSNEKSCEKHDRLPSEGFLRSVNLHRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30689133
AAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCT
CTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTT
TCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGAAGATTTACGTTCTTCCTATTTGACCCG
AAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACGGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCT
AGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATG
GGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAA
AGTCGAGAGGGAAACAGCCCAGATCATACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGGTCGAGCGATGACAACCAGGAGGTGGGCTTG
GAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACTGAAGTGACGAGAC
CTTGAAAGCAACTTTTTCAAGTGTCAGTAGCGGGACGTTCTATCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGA
CATGAGTAACGAGAAATCCTGTGAAAAACACGATCGACTGCCATCGGAAGGCTTTCTGCGTTCAGTCAATCTACACAGAGTGAATCGGTCCCTAAGGAAC
CCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTA