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Detailed information on CNT30689128


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000336, E-value = 2e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Triticum urartuOryza sativa64.3438.1798.831196reverse complement
CNT30524653Triticum urartuSetaria italica28.1943.7499.24524forward
CNT30548882Triticum urartuIpomoea triloba53.3637.6397.88992forward
CNT30632593Triticum urartuVigna unguiculata53.6859.1296.89998forward
CNT30635645Triticum urartuCapsicum annuum22.1666.5692.23412forward
CNT30304298Triticum urartuTriticum aestivum81.0156.9298.871506reverse complement
CNT30221494Triticum urartuHordeum vulgare41.8562.6498.97778forward
CNT30400948Triticum urartuTriticum turgidum81.0160.24991506reverse complement
CNT30569653Triticum urartuActinidia chinensis1747.0996.84316reverse complement
CNT30585815Triticum urartuMusa acuminata53.9541.3395.111003forward
CNT30147394Triticum urartuMedicago truncatula53.585097.49996forward
CNT30440683Triticum urartuAegilops tauschii49.3895.0398.69918forward
CNT30662061Triticum urartuTriticum dicoccoides70.6868.4798.861314reverse complement
CNT3081478Triticum urartuBrassica juncea39.9764.1694.21743forward
CNT30143344Triticum urartuLolium perenne72.6760.3997.711351reverse complement
CNT3016633Triticum urartuZea mays72.7370.7595.931352reverse complement
CNT3067373Triticum urartuLeersia perrieri15.0692.7299.29280forward
CNT30655299Triticum urartuRosa chinensis53.3134.9297.88991forward
CNT30203595Triticum urartuHelianthus annuus53.9554.7596.011003forward
CNT30595506Triticum urartuOryza meridionalis18.531.27100344reverse complement
CNT30369805Triticum urartuOryza glumipatula51.8667.2296.37964forward
CNT30420891Triticum urartuPapaver somniferum31.7421.9792.03590reverse complement
CNT30104648Triticum urartuOryza rufipogon25.1780.2798.72468reverse complement
CNT30575706Triticum urartuOryza barthii51.6939.4396.46961forward
CNT30582488Triticum urartuEchinochloa crusgalli64.2398.3599.161194forward
CNT30495774Triticum urartuDigitaria exilis21.1499.2499.24393reverse complement
CNT30116696Triticum urartuOryza nivara64.3430.1698.911196reverse complement

Expression of CNT30689128

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MRLRRNCHRVMCQRYYLIECQHVVVLSARISPLGAGAFGSTFTCEPKSSCRTPSFLIAVLTFFIFRRGL*

>peptide 2 (63 aa)
MLSKPIHLSETEESGISCVGVKSVDLRRNAKSEGSSLGPYRRWGAKAWGANRIRYPGSPCRKR*

>peptide 3 (34 aa)
MTGLEEEAPANSVPAADVRRGGQVFFGMTGRKGT*

>peptide 4 (42 aa)
MMVSWSFRMISHTGTETRPGLPQGAAVENLGQWAKARSSNIA*

>peptide 5 (35 aa)
MQVERCFRGAGQKEKRLLAKVVSPCFKTTGRALRL*

Sequence

>CNT30689128
CTTGCTTGTAGTTTTGGATCGATTCCGTGTATTTCACATATTTAAGAGTGGTTAGGAGAGAGAATCAATGTTTATGGGAAGAGGGAAAGAAAGATCAGGG
GAAGAAGCGGGGTAGAGGAATTGGTCAACTCATCAGGCTCATGACCTGAAGACTGCAGGTTCGAATCCTGTCCCCGCCTAATCATAGTCAAAATCTGAGT
TTGATCCTGGCTCAGAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGTTGTTTTCGGGGAGCTGGGCAGAAGGAAAAGAGGCTCCTAGCTA
AAGTTGTCTCGCCCTGCTTCAAAACTACAGGGCGCGCGCTACGGCTTTGACCTAACGGCCTCCGTTTGCTGGAATCGGAATAGTTGAGAACAAAGTGGCG
AACGGGTGCGTAACGCGTGGGAATCTGCCGAACAGTTCGGGCCAAATCCTGAAGAAAGATCAAAAGCGCTGTTTGATGAGCCTGCGTAGTATTAGGTAGT
TGGTCAGGTAAAGGCTGACCAAGCCAATGATGGTTAGCTGGTCTTTTCGGATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACAGGGGGC
AGCAGTGGAGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCG
CGATCATGACAGGACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGATGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAA
AGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGTCGCCAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAA
TTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGG
AGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTACGCGGATCAGGGGCCCAGCTAACGCGTGAAACACTC
CGCCTGGGGAGTACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAAC
CTTACCAGCCCTTGACATATGAACAACAAAACATGTCCTTAACAGGATGGTACTGACTTTCATACAGGTGTTGCATGGCTGTCGTCAGCTCGTGTCGTGA
GATGTTTGGTCAAGTCCTATAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAATTGCCACCGAGTGATGTGCCAGCGCTACT
ACTTGATTGAGTGCCAGCACGTAGTTGTGCTTTCAGCAAGAATTTCACCATTGGGAGCCGGTGCCTTTGGAAGCACTTTCACGTGTGAACCGAAGTCGTC
TTGCCGAACTCCTTCCTTTCTCATTGCAGTCCTCACCTTTTTCATCTTTCGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAGGTGGCGAGAGAGCAGAG
CGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCTAGGAAAAAACTTCGAATTGGG
AGGGCGATCCTCCTGGTGAACTGACCGTACCCCAATCCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCG
GCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAG