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Detailed information on CNT306891


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673536Zea maysSetaria viridis17.5253.6984.4109forward
CNT30604840Zea maysOryza punctata17.8531.8182.88111forward

Expression of CNT306891

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVKETTESIRVSIRCLLHGPKLLLKEFEDL*

>peptide 2 (30 aa)
MGILKWEFRRYGIRFPFPILWLRKRPNLYA*

>peptide 3 (70 aa)
ALLRFGAQCPINITCRDLPLWSMRVTDLESQTGIAQRRCNNSSTSLNLFIYKPSTCFVRSSFICLKTVAG*

Sequence

>CNT306891
GCCCTCCTGAGATTTGGGGCTCAATGTCCTATTAATATCACGTGTAGAGACCTTCCCTTATGGAGTATGAGAGTTACAGATCTCGAATCTCAGACAGGCA
TTGCCCAACGCCGGTGTAACAACTCCTCTACTTCACTAAACCTGTTCATCTATAAGCCTTCCACTTGCTTTGTGAGGTCCTCATTTATATGCCTCAAAAC
AGTGGCTGGCTGAATTATTCTTTTTTTTTGTTTATGTGACGATGTCACTTCATCAGTTATGTATGAATTGGTAATACACAATGGTGCTTTTATGAAAAAT
GCATGTAGACTTGTTCTGACTGTGCCAAGGATCTGAAGGTGTGTCCCATATGCTAGAGGGTGATCTCCACACGACTGAAGCTCTACAGAAACACCATCAG
TTGAAGGGGGTGGCAGGAAGACTATAAAACTACTTTGTCTGGTGGGTTACTTTTAGTATCTGAATATGGGGATTTTGAAATGGGAATTTAGGCGCTATGG
GATCAGGTTCCCGTTTCCCATCTTATGGTTAAGGAAACGACCGAATCTATACGCGTGAGCATTAGGTGTTTGTTACACGGGCCTAAACTTCTACTGAAAG
AGTTTGAGGATTTGTAGTCTTT