Detailed information on CNT30689059


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30438754Triticum urartuAegilops tauschii15.4699.52100209reverse complement

Expression of CNT30689059

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MWSISRRIMKDRLYPYTNGCFHKEAIEGFPQIEIWP*

>peptide 2 (36 aa)
MKLLHERPDLTQDEWRWGFSNETRDQKVTNGAIQSI*

>peptide 3 (57 aa)
MNGVGVFQMKPAIRKSPMEPYNLSSSVPWHGTPLRQWKEQLSIAFISSKIVSRLPIK*

>peptide 4 (48 aa)
MDVFIRKPSKAFHKLRFGRRRIELYPRNRGIQKSNKRNAQTNQSYRSY*

>peptide 5 (59 aa)
MQDTAIIRNSRIRNAVIYSFPKLLIPDQPTEMQIGIRNVVNITKNNERPSIPIYKWMFS*

Sequence

>CNT30689059
TGCAGAGGAAAAGCTTGATCCCAGCGAATAGAAGATGCTCAGCTCCGCACAACATAGGGATTGGCACGCTTTCGGAAAGAACATAGAATAGTAGAGGATC
CAGCATGCAGGACACGGCGATCATTAGAAATTCACGAATTAGAAATGCTGTAATATACTCTTTCCCAAAACTTCTCATACCAGACCAACCCACTGAAATG
CAAATAGGGATCAGAAATGTGGTCAATATCACGAAGAATAATGAAAGACCGTCTATACCCATATACAAATGGATGTTTTCATAAGGAAGCCATCGAAGGC
TTTCCACAAATTGAGATTTGGCCGTAGAAGGATCGAATTGTATCCGAGGAACAGGGGGATACAAAAAAGTAATAAGAGAAACGCACAGACCAATCAATCG
TATCGGTCTTATTGAAGAATTTGGAATGAAAAGAGGAGTAATGCTTCCTAGCACGGGACAGAGAATAGGACCACTTAGATCGAAATAGCATTCACAGAAA
TGTTCTAACATAGAGTAGAATTGAACATTGAAAAGATTAGTTGACAACAGTCAATCAAAAGATGGGGCGCCAAATTACTAAACAATAGGGGTCTTTCTGT
GCAAGTCAGCTGAACACCGTAATTGATGAGTGAGTAGGTGGGTTAGGTGCACCCCTCGCCCAGTGGGAAGTCATGAGGCTAGCCCCCCCCCCTGAATGAA
GAAGTAGTGGGGCCCCCTGCCCGCCCACGTATGCGCCTTTATTTAGATTATAACTAAATATTATACTGAACTTTATCCGGGAATCTTTCTAAAGAATCCA
TCTGGCAAAACGCAATTTGTCGATTTCAATCTAAGGTGCACCTTGCCTTTTTCAGGTAGCTTTGTTACGCCTATTCAGCTAGGTGGGGCATTGGTCATAG
CCGAAGTCGAAGGGAAAAAATAAGGTAATGAGATGATGGTGCCATCAAGAAGTTTTCGACGAACGTAGTAGCGGCCAAAAATGAAACTCTTGCATGAAAG
ACCGGATTTGACGCAAGATGAATGGCGTTGGGGTTTTTCAAATGAAACCCGCGATCAGAAAGTCACCAATGGAGCCATACAATCTATCTAGTAGTGTGCC
GTGGCACGGTACTCCGCTTCGGCAGTGGAAGGAGCAACTGTCTATTGCTTTTATCTCATCCAAGATAGTGTCTCGTCTCCCCATAAAATAGATAAGCCTG
TAGTTGAGCACCTATCTGAAGGCCCAATCGGCATCAGTAGTTGCACGCAACTCTAAAGAAGACGATGACGGAAAAAAGGACGGCTCGAGAAAAGGTACCT
CGAATATATCTAAGAATCCGATGAACTGCTGCAAAGTGAACTGACCGGGGGG