Detailed information on CNT30689043


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 7e-38

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677010Triticum urartuSetaria viridis42.3291.5193.3851forward
CNT30225309Triticum urartuHordeum vulgare52.6187.895.181058forward
CNT30554009Triticum urartuOryza glaberrima18.1566.9796.99365forward
CNT30576679Triticum urartuOryza barthii18.3570.2997.83369forward
CNT30585638Triticum urartuEchinochloa crusgalli39.0950.7898.85786reverse complement

Expression of CNT30689043

Peptides detected in this lncRNA

>peptide 1 (62 aa)
QKRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS*

>peptide 2 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 3 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLNRAIVTAYGPEPG*

>peptide 4 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRC*

>peptide 5 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 6 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

>peptide 7 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

Sequence

>CNT30689043
TCAAAAGAGGAAAGGCTTGCGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGA
TCCGGAGATTCCCAAATAGGTCAACCTTTTAAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG
AAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCT
GCTAGGCGAAGCAGTTGAATGCCGCACCCTAGATGGCTAAAGTCAAGTAGCCGAAAGCATCACTAGCTTATGCTCTGACCCGAGTAGCATGGGGCACGTG
GAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGTGAAAAGAACCCCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTG
GGAGGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAG
CGAAAGCGAGTCTTAATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGG
TCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGA
GGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC
CCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAAT
GACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAG
CGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAAC
CGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCG
CAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTA
CGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATGGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGC
CTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACTAGCGATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGTG
CTGAAGTATGTAACTGATGCCATAGTCCCAGGAAAAGCTCAAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCAACACAGGTGGGTAGGTAGAGA
ATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAAAGGGGGCCGCAGTGA
CCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAG
TTGGTGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGT
TCCGACCCGCA