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Detailed information on CNT30688989


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 3e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Triticum urartuOryza sativa24.4510098.75481forward
CNT30671914Triticum urartuSetaria viridis49.6758.7598.36977forward
CNT30524649Triticum urartuSetaria italica51.9130.9899.021021forward
CNT30378673Triticum urartuArabidopsis thaliana36.657.7496.53720reverse complement
CNT30156864Triticum urartuPistacia vera18.0524.1395.77355reverse complement
CNT30185187Triticum urartuSecale cereale98.9855.0599.851947forward
CNT30299053Triticum urartuTriticum aestivum98.9854.3499.541947forward
CNT30223648Triticum urartuHordeum vulgare64.2653.2296.441264forward
CNT30394721Triticum urartuTriticum turgidum98.9853.1599.851947forward
CNT30234026Triticum urartuBrassica oleracea19.0694.4694.13375reverse complement
CNT30258698Triticum urartuAvena sativa21.3551.9898.81420reverse complement
CNT30670388Triticum urartuTriticum dicoccoides98.9869.4499.591947forward
CNT30140161Triticum urartuLolium perenne98.9857.299.491947forward
CNT30605073Triticum urartuGossypium raimondii39.250.7296.5771reverse complement
CNT30721631Triticum urartuTriticum spelta98.9856.0699.691947forward
CNT30346087Triticum urartuEragrostis tef39.8175.7399.87783forward
CNT30595568Triticum urartuOryza meridionalis19.5298.9798.96384reverse complement
CNT30603680Triticum urartuOryza punctata51.625.7299.611015forward
CNT30557400Triticum urartuPanicum hallii32.6446.7998.13642forward

Expression of CNT30688989

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 2 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 3 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (31 aa)
RNLLMMRLKRALTGLGGPNPRMWQNTGMTCG*

>peptide 5 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 6 (50 aa)
KPAHDAVEESSNRPWRTEPTYVAKYGDDLWLGVKGQPRSDIAGFPRNLFQ*

Sequence

>CNT30688989
CGAAACCTGCTCATGATGCGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGT
GAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAG
GGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGA
GAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCA
GCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAA
AGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAG
TAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGA
AAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGC
TGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTAC
GCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGT
TGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCAGCGGG
CGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTT
CAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGG
ATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACC
GTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAG
AAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATG
TATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGT
CCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTC
TCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTG
GGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCA