Detailed information on CNT30688963


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCSAT001803, E-value = 3e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524665Triticum urartuSetaria italica64.1341.8990.04261forward
CNT3020382Triticum urartuCitrullus lanatus59.2148.389.21241forward
CNT30632293Triticum urartuVigna unguiculata24.3217.4988.8999forward
CNT30198677Triticum urartuPisum sativum58.4867.8186.55238forward
CNT30284073Triticum urartuTriticum aestivum10012.9398.03407forward
CNT30555990Triticum urartuOryza glaberrima10025.9492.87407forward
CNT30436372Triticum urartuAegilops tauschii90.6654.8399.46369forward
CNT3077544Triticum urartuBrassica juncea57.9914.7990.25236forward
CNT30208139Triticum urartuHelianthus annuus59.2171.0989.21241forward
CNT30366171Triticum urartuSorghum bicolor45.2116.8890.22184reverse complement
CNT3054279Triticum urartuAmborella trichopoda59.2135.6586.72241forward
CNT30116714Triticum urartuOryza nivara78.6241.5691.56320forward

Expression of CNT30688963

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MIVLLSVDDFFLVQCPFSMVSKREISHFYLWSHSHNRGRGKSMNLIRFVF

Sequence

>CNT30688963
CCAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCAGACCATCC
TACAAAAACGAAACGGTCCCTTCGTAACCAGTCATCCATAGTATCAAATAGATCATTTTCTTCTTTAGGAATTCTACCAAGGGCTATAGTCATAGTGATC
CTCCTATTCAATTACTTCAACCATTTCCGAGCACCTCATATCACTTTCCAAGGCATATGATAGTTTTATTATCTGTGGACGATTTCTTTCTCGTTCAATG
CCCTTTTTCAATGGTCTCGAAGAGAGAAATTTCCCATTTTTATCTATGGAGTCACAGTCACAACCGAGGTCGTGGTAAATCCATGAATTTGATTCGATTT
GTTTTTC