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Detailed information on CNT30688894


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006944, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674625Triticum urartuSetaria viridis31.4792.9698.86264forward
CNT30390355Triticum urartuTriticum turgidum67.5881.7100567forward
CNT30566352Triticum urartuActinidia chinensis9.0620.7785.5376forward
CNT3067537Triticum urartuLeersia perrieri23.2466.192.31195forward
CNT30357533Triticum urartuLactuca sativa61.6250.7991.49517reverse complement
CNT30148151Triticum urartuBrachypodium distachyon39.2123.597.87329forward
CNT30602359Triticum urartuGaldieria sulphuraria26.5877.780.27223forward

Expression of CNT30688894

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLIFNSPKHFVACYALPRLWVPRYPPQAFPLLNLAINVKAMPS*

Sequence

>CNT30688894
CACACGGGATTCCACGTGTCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCAGCTACTGGACTTTAGCCATCTAGGGTGCGGCACTCAACC
GCTTCGCCTAGAAGCACAACGCTTGTATTGCTCTCCCACAATCCTGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTT
TTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCTCATGGATTCAGCAGGCAGTTTAAAAGGTTGACCTATTTG
GGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGCAAGCCT
TTCCTCTTTTGAACCTCGCCATTAACGTTAAGGCTATGCCATCCTAAGGTGCTACTAAATGGAAGGATCTTATCAACGTCCATGAATGTGAAATCATAGA
TCGAACTGCCGAATTGGCAAAATTCGGTGCTATCGCTATCATAGTATCCGCTAAGTTCACGGGCTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCA
CAGGGTAAACCACCGCCTCTCAGGCCTCCCCGACGGGTTCTACCATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTACAACTTTCATC
GTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAACAAAAGGTGCTGAGTTGGAATCCCATTCTAAGGATTCTTGTGGTTCCGGGGAATCCA
GTTACAGGAGAACCAGGAACGGGGAGCTCTCCCCTTTTT