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Detailed information on CNT30688788


BLAST search results

BLAST vs Swiss-Prot:
sp|P05312|NDHI_WHEAT, E-value = 1e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045457Triticum urartuPrunus dulcis22.158.2384.29210forward
CNT30511569Triticum urartuSolanum lycopersicum8.2331.7110078forward
CNT30659065Triticum urartuTriticum dicoccoides19.4132.899.46184forward
CNT30211757Triticum urartuHelianthus annuus18.7865.287.08178forward
CNT30327547Triticum urartuAsparagus officinalis35.9710.8290.91341forward

Expression of CNT30688788

Peptides detected in this lncRNA

>peptide 1 (36 aa)
TVLNTIATKYTNSEINTIIKQLFSFNILFKSPIHNG*

>peptide 2 (32 aa)
MKKICFFLLFERAFVLKIFLLLLYYLIYSETS*

Sequence

>CNT30688788
ACAGTACTCAACACAATTGCCACAAAATATACAAACTCCGAAATCAATACTATAATTAAGCAATTGTTTTCTTTTAATATCCTTTTCAAATCTCCAATCC
ACAACGGGTAAATCTATCGGACATACGCGAACACATACTTCACAAGCAATACATTTATCAAATTCAAAGTGGATTCGCCCTCGGAAACGCTCTGGTGTAA
TTGATTTTTCATAAGGGTAGTGAATCGTTATAGGTAAACGATTTGTGTGGGATAAGGTAGTTATGAAACTTTGACCTATGTACCTTGTAGCACGTATTGT
TTGTTGACCATAACTCATGAACCCAGTTACCATAGGGAACATATTCATTCTAAATATCTATGAAAAAGATATGTTTCTTTCTCTTGTTTGAGAGAGCTTT
TGTGTTGAAAATATTCTTACTATTATTGTATTATCTTATTTATAGTGAAACAAGTTGAGAAGAGGTTGTTAATAAGAGATTGCCCAGGGAAATAGGTAAA
AGAAATTTCCATCCAAGATTTAATAACTGATCCATTCTCATCCTCGGTAAAGTCCATCTTATTGTGATAGAAATGAAGAGAAATAAATAAGCTTTAGTTA
ATGTAATAAATATACCCATTGTCATTTCCAAAATTCCAACTGCTTAATTCATTTGGAAAAAATCAAAAAAGGATATATAGGGAATAGATAAATTCCACCC
GCCCAAGTAGAGAACTGTTACAAATAAAGAAGAAACTACGATTCCACTTCGACAAAAGGAAAGAGCATACCTAAGTTCAATAGCTTTACGTCCGCTATCC
CGATCATGATTTTCCTACCCTCAGGGGGAAAGTAAAGGCCCTTCCCCCTTTGGAAGGTTGTGGGCGAGGAGGGATTCGAACCCCCGACACCGTGGTTCGT
AGCCACGTGCTCTAATCCTCTGAGCTACAGGCCCAGCTGTCTCCACTG