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Detailed information on CNT30688537


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 3e-31

BLAST vs NONCODE:
NONSTUT001022, E-value = 5e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Triticum urartuSetaria viridis41.9915.3797.9497forward
CNT30517898Triticum urartuJuglans regia49.3512.685.09114forward
CNT30378101Triticum urartuArabidopsis thaliana42.4211.1185.7198forward
CNT3019808Triticum urartuCitrullus lanatus53.6818.5185.48124forward
CNT30379140Triticum urartuManihot esculenta54.9815.185.04127forward
CNT30402728Triticum urartuBeta vulgaris41.9918.5587.6397forward
CNT30526134Triticum urartuPhaseolus vulgaris54.9819.9485.04127forward
CNT30630919Triticum urartuVigna unguiculata54.119.3886.4125forward
CNT30712340Triticum urartuGlycine max32.0312.8791.8974forward
CNT30158908Triticum urartuPistacia vera34.24.8386.0879forward
CNT30636154Triticum urartuCapsicum annuum32.0316.0291.8974forward
CNT3094731Triticum urartuSolanum tuberosum54.558.3987.3126forward
CNT30187977Triticum urartuSecale cereale55.8417.8789.15129forward
CNT30394033Triticum urartuTriticum turgidum55.849.5389.92129forward
CNT30566784Triticum urartuActinidia chinensis54.1116.4586.4125forward
CNT30510227Triticum urartuSolanum lycopersicum54.5510.7684.92126forward
CNT30145670Triticum urartuMedicago truncatula54.1130.7183.2125forward
CNT30314068Triticum urartuCamelina sativa54.988.3888.98127forward
CNT3082269Triticum urartuBrassica juncea36.3612.9691.6784forward
CNT30606420Triticum urartuGossypium raimondii53.6821.7288.71124forward
CNT30652736Triticum urartuRosa chinensis40.6916.2389.3694forward
CNT30625276Triticum urartuDaucus carota54.989.0390.55127forward
CNT30477326Triticum urartuArabidopsis halleri32.038.3790.5474forward
CNT30362217Triticum urartuSorghum bicolor40.6917.9790.4394forward
CNT30704690Triticum urartuPrunus avium36.84.1889.4185forward
CNT3055928Triticum urartuAmborella trichopoda34.639.1187.580forward
CNT3022206Triticum urartuPopulus trichocarpa47.1920.0486.24109forward
CNT30323609Triticum urartuAsparagus officinalis54.117.5191.2125forward
CNT30558289Triticum urartuPanicum hallii43.2917.0485100forward
CNT30551470Triticum urartuOryza brachyantha55.4129.4394.53128forward
CNT30113681Triticum urartuFicus carica34.210.8584.8179forward

Expression of CNT30688537

Peptides detected in this lncRNA

>peptide 1 (35 aa)
EMLRGRSSESTMPLTKLSHSGISSSQLSMMKTRLL*

>peptide 2 (75 aa)
RDVEGKILRVNNALDKAQPLWDQLLTVVHDEDTALVEGSILILGDLLRLPHPDGLLLVDQVPLVRNLLDLLLFLLL

Sequence

>CNT30688537
GAGAGATGTTGAGGGGAAGATCCTCAGAGTCAACAATGCCCTTGACAAAGCTCAGCCACTCTGGGATCAGCTCCTCACAGTTGTCCATGATGAAGACACG
GCTCTTGTAGAAGGCAGCATACTCATCCTTGGTGATCTCCTCAGGCTTCCTCATCCAGATGGGCTTCTGCTTGTTGATCAGGTTCCACTCGTGAGAAACC
TCCTTGATCTTCTTCTTTTTCTTCTCCTTTT