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Detailed information on CNT30688530


BLAST search results

BLAST vs Swiss-Prot:
sp|P55307|CATA1_HORVU, E-value = 1e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692136Triticum urartuOryza sativa31.610.9582.84134forward
CNT30673657Triticum urartuSetaria viridis22.8840.2593.8197forward
CNT30281433Triticum urartuChenopodium quinoa45.5218.6582.9193forward
CNT3070082Triticum urartuQuercus suber39.8668.1579.88169forward
CNT30380803Triticum urartuManihot esculenta56.651.1782.5240forward
CNT3046375Triticum urartuPrunus dulcis26.4216.0583.93112forward
CNT30305192Triticum urartuTriticum aestivum57.5545.02100244forward
CNT30668803Triticum urartuTriticum dicoccoides58.2532.12100247forward
CNT30475173Triticum urartuSaccharum spontaneum56.632.391.67240forward
CNT30715065Triticum urartuMalus domestica golden56.8416.9579.67241forward
CNT30624536Triticum urartuDaucus carota39.3911.8982.04167forward
CNT30368538Triticum urartuSorghum bicolor43.1630.588.52183forward
CNT30370393Triticum urartuOryza glumipatula29.0152.3489.43123forward
CNT30154060Triticum urartuPrunus persica26.4211.1684.82112forward
CNT30576776Triticum urartuOryza barthii5059.8993.4212forward

Expression of CNT30688530

Peptides detected in this lncRNA

>peptide 1 (37 aa)
QVPPTVTASSSKRHLTPHVGFQWNLTRCAFPSLLIKV*

>peptide 2 (64 aa)
MPTSSKRKVNMCRLSGWCEKKSTILQFSCMLVFGLGLKAWTMSGNFIPSRMKNTGILFPTRSKLP

Sequence

>CNT30688530
CAGGTGCCTCCAACAGTAACGGCTTCATCATCTAAGAGGCACTTGACACCACATGTAGGCTTCCAATGGAACTTAACAAGGTGCGCCTTTCCATCCCTGC
TGATTAAGGTGTAGGTGTTGACACCAAAACCGTCCATGTGCCTGTAGTTGAGTGGAATGCCAACATCATCAAAGAGGAAGGTGTAGGTGTTGACACCAAA
ACCGTCCATGTGCCTGTAGTTGAGTGGAATGCCAACATCATCAAAGAGGAAGGTGAACATGTGCAGACTCTCCGGGTGGTGCGAGAAGAAGTCAACTATT
CTCCAGTTCTCCTGCATGTTGGTCTTTGGACTTGGCTTGAAAGCATGGACCATGTCAGGGAACTTCATCCCATCTCGGATGAAAAACACAGGCATATTGT
TCCCAACAAGGTCAAAGTTACCCT