CANTATAdb - search

Detailed information on CNT30688390

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30308114	Triticum urartu	Triticum aestivum	100	51.03	95	520	forward

Expression of CNT30688390

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSRGAEQNATVDCVTQQDGRGRTEVSFSLPGVSEDYSEFCSEKASASLNNPVGISTISG*

>peptide 2 (30 aa)
MGEAEQKSPFLFPGFQKTIPSFVQRRQAHL*

Sequence

>CNT30688390
AGCTGACTCATATCCGAGGACTTGACGCGTTGTGAATTGTGACGGCGACAAGTGATGGAGCGATGAGTGGAAGATAAGTTCTTTGCTTTGTTTTGACCCG
GACACGAAGATAAGGTTTTTTGCTTTGTTTTGACCTGGACACAAAGATAAGTTTTTGCTTTGTTTGACCTGGACACGAAGATAAGTTTGATCTCTACAAC
CCAAGTGCATGCGTCTTTTTCTTTGAAATGTCTCGAGGAGCGGAACAGAATGCAACTGTGGATTGTGTGACGCAGCAGGATGGGAGAGGCAGAACAGAAG
TCTCCTTTTCTCTTCCCGGGGTTTCAGAAGACTATTCCGAGTTTTGTTCAGAGAAGGCAAGCGCATCTTTGAACAATCCTGTTGGGATAAGCACCATCTC
GGGCTAGTACATCTCATCTGTGCAGAGAAGCATCTTCCAAGGTGTCGCAGTTCAGTCGTTTAAAGTACAGGTGGCCGTGAGAATTGTGGTTGGATTGGAT
TGGTTATCTGCTACTCCACT