Detailed information on CNT30688229


BLAST search results

BLAST vs Swiss-Prot:
sp|P68538|MI25_WHEAT, E-value = 5e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535768Triticum urartuEucalyptus grandis12.5156.892.55376forward
CNT30222882Triticum urartuHordeum vulgare19.8662.6499.33597forward
CNT30592658Triticum urartuMusa acuminata16.2322.2989.55488forward
CNT30555485Triticum urartuOryza glaberrima8.8221.2298.87265forward
CNT30435041Triticum urartuAegilops tauschii9.8510098.99296forward

Expression of CNT30688229

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFDQCCLVCLDPRFLSKKRHGIIDQFTILFI*

>peptide 2 (32 aa)
MICIRRGAAMIPPARNKYLSLLYLRKEKISWC*

>peptide 3 (71 aa)
MNLLQPFPIQRGAAELLVCKVGKFPPSYLGVPLHWSKPSSNFLHLEFPSKLAITILIDQKGIEKGDAITRP*

>peptide 4 (55 aa)
MCQRGFPAHGIALAGASCQSPGHAHLKEFPHTMGAVSTISALRCKLGGISYQTPG*

>peptide 5 (36 aa)
MLLPFYTLILALKRCSRQGIIKSHLTYIQLEVFHCF*

>peptide 6 (49 aa)
MRFLKKSIDGASGKGFGGVWLVDGSDLNSSFPSVSLRPTPFFVDHHLLA*

>peptide 7 (46 aa)
MLTSDLERINHSLRKEKCTPALCLVKLPPFIALFTVCSNSFISMLG*

>peptide 8 (76 aa)
MVLQEKGSAGCGLWMALTSTPLFHRCLSVPPLFSLIIISWRSGSTRRGLYDRRDSCPFLPGRFHKINKKKSSEENA*

>peptide 9 (75 aa)
MRREEVAFRSVADFTFRFRHNKACTVFSHLGAQRAVGNDSTTVLQIRKLILSNRCCSLDSSGITSLGLKNCCNAS*

>peptide 10 (43 aa)
MGLLPFVTPKILASLGHIREDLGDFDPFLRARRFKVKIRVSRA*

Sequence

>CNT30688229
CCCGACCCAGGTGACCTACTTTCTCAGATGAGAGATTCGGCGGAGTAGTAGGAAGTCCCTGTGGAGAACTAGAAGACAAAACGAATATAGCGGACCAAGC
AATGAATGACCTAGCCTAGGTAGTCCTATGTTTGACCAATGCTGCCTTGTATGTCTTGATCCAAGATTTCTCAGCAAAAAAAGACATGGGATTATTGATC
AATTCACCATCCTCTTCATCTGAGTGTGCTTCCACTTTATCGTTTGTGGCATGTGCATTATGCAACAAGTAGATTCCTGATAAATGAACCTTCTCCAACC
CTTTCCTATCCAACGCGGAGCGGCAGAACTACTCGTCTGCAAAGTGGGAAAGTTCCCTCCCTCCTACCTAGGTGTACCTCTTCATTGGAGCAAACCATCC
AGCAACTTCTTACATTTAGAATTCCCTTCTAAGCTGGCTATAACCATCCTTATTGACCAGAAAGGAATTGAGAAAGGGGATGCTATAACCAGACCATAGA
CAGCGTTTCCACATTCACTTTTGAACTTAGGGAAACAGTGAAAGAAGCCCTCGTTCCCGCTCTTCTTTCCCCCGACTTACCCTTAGAAGGAAAGTAGGGG
CCTCGGTTTCTGCAAAGAAACCTACACCAGTGAATTTCTTTTTCGTAGGTGATCCCGCTCCCAATCGCAGATTTGAATAATCAAGTCGGTATGGGGCTGC
TCCCTTTTGTTACTCCTAAAATATTGGCCTCGCTTGGACATATCCGCGAGGACCTGGGCGATTTTGATCCGTTTCTCCGCGCTCGCCGTTTCAAGGTGAA
GATCCGAGTAAGTAGAGCGTAATAGGCGATCCGCCGGGCACTTATTTTGACAGGACCTAAGAACCGTTTTAATGCGTTTCCTTAAGAAATCAATAGATGG
TGCTTCAGGAAAAGGGTTCGGCGGGGTGTGGCTTGTGGATGGCTCTGACCTCAACTCCTCTTTTCCATCGGTGTCTCTCCGTCCCACCCCTTTTTTCGTT
GATCATCATCTCCTGGCGTAGCGGAAGCACTCGACGAGGCCTCTACGACAGAAGAGATTCTTGCCCGTTTCTGCCCGGACGATTCCATAAAATAAATAAA
AAGAAAAGTTCAGAGGAAAACGCATAACCAGAAGAAAAAGATATCGTGATGTAAAATGATCATTCGGACACCCTCACCTTTCTTAGGACTATCAAGCCTT
CTCGAATTAGGTCTATGGTAGAAGCTTTGAACGTAGACCCGGATACAAATCTTTCACTCACTGAAAAGTGAAAACCTGTGACTATATCGTCCTGAAGACG
GATGCGGCGGGAAGAAGTGGCATTTAGAAGTGTTGCTGACTTTACATTTAGGTTTCGGCATAACAAAGCTTGCACTGTCTTTTCGCACTTAGGCGCACAG
CGTGCCGTTGGTAATGATTCTACTACGGTGCTGCAAATTCGCAAGCTGATCCTAAGTAATCGTTGTTGTTCATTGGATTCCTCCGGAATTACTTCGTTAG
GATTGAAGAATTGCTGCAATGCTTCCTGAATAGACTCGATTCTCCCGTCGAGAGTTTCTTTGAAAGTCTTACCTAAACTCTTCCGACTGAATATGAGAAA
GCCTATAAAACAACGAGCTACTATCATTTCTTCATTATAGATTGAGATCTTCTTCGGACTTGATGCACAAATAGATGGAATAGCAGCAAATAGCATATTT
CTATCCTTCATATCCGTAGAAAGAAATCTCATCTCCAGGTAACTCCATCTTTTTCAGCTCTGCTCGCTCACTTTTGAAAGGAAAGGAGACTGATCTTGAC
GTCGGCGTGGGTTCTACCAACGAAACGAATCCGTTTTGGATTGAGATTTCACATAAGCATTGCACAATGATCTGCATTAGGCGGGGAGCAGCAATGATAC
CGCCGGCCAGGAATAAGTACCTATCCCTCTTATACTTAAGAAAAGAGAAGATAAGCTGGTGTTGAGAAATGAGAAGTGGGCTATATCCCCGGGGACTTTT
TAAAAGCAGCTGAAAGGAAATGCTGCTTCCTTTCTATACGCTAATTCTTGCTTTGAAGAGATGTTCCAGACAAGGCATTATTAAGTCCCACCTCACCTAT
ATCCAACTTGAGGTATTCCATTGTTTCTAGTATAATAAGCAGGTTTAAGCCATGGAAGACATGAGTCACTAAAGTGCTGTTAACTAGATCGCGAAAGATG
TGCCAAAGAGGTTTTCCAGCACATGGAATAGCACTCGCAGGGGCATCCTGTCAGTCGCCAGGCCATGCACATTTGAAAGAATTCCCACACACAATGGGAG
CCGTTTCAACCATTTCTGCTCTACGTTGCAAACTAGGGGGCATAAGCTACCAAACCCCTGGCTAAGAATCTATATCATACCGAGCAATCATTCCGTCTTC
TTGAGAAGAAAGAACGCATGAATCCTCGCTTTGAGCTCACCTACGAGTGCACCTAACAAGGTTTTCCAGACCTAATAAACGTTCATTGCAAAGAAATGTT
GACCTCTGATTTAGAGAGGATCAACCACAGTTTGAGAAAAGAAAAGTGCACACCGGCATTATGCCTCGTAAAGCTACCCCCATTCATAGCTTTATTCACT
GTCTGCTCGAATAGCTTCATTTCAATGTTAGGATGACCCGCAAGGTCGTCTAAAATAGCTTCCACCTATCTAGTTTCCATGTGGCACGCCAACCACAATC
ACTTCATCCCTTGGCTTCTTTATCATAGCTGCCTACCTCTTCAGATCAAGGATCAAAGACTATAGGAGCTCAAAGTTATTGTCCGCACACTTCCATCTAG
GAGATGCATGTTAAGCTATCCCTTGGATTATAGCCTAGGAGATCGATTGGCAGGCCTTGTTCTATGAAAAGAGTATCCTTATGGTTTAGGAACCCCAACA
TCTATTGAAAAGTATGATGCACCCCTCGGTTTACCAACATTTCCATTCAATCTCATTTAGATTCTATTAACTAACAAGCCGGGATCCAATTCCATTTCAA
CCGCTG