Detailed information on CNT30688027


BLAST search results

BLAST vs Swiss-Prot:
sp|P93286|CCMFC_ARATH, E-value = 6e-111

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3053857Triticum urartuAmborella trichopoda8.9923.0584.43289forward
CNT30103886Triticum urartuOryza rufipogon6.62100.4797.65213reverse complement

Expression of CNT30688027

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYAQAQQSAHPLLAASRSFYSIPVHSGIGG*

>peptide 2 (49 aa)
MLFEPFLLLRFEFLFLLLSNYSFFSCICVRHNLLIDLYSDTLLYHSLYY*

>peptide 3 (33 aa)
MYVQLQLVLLLSDLSRGILGTASLITATITSPI*

>peptide 4 (32 aa)
MIETSQTTTFLPHMEFGTQGQSLSELYLIRIS*

>peptide 5 (49 aa)
MLNATSPTGITCAFVSLSVVSTGCFRAVRLTPIRINSSKVPYPYARILE*

>peptide 6 (48 aa)
MYSHFSRAPRFSNGKKVSSFWEHAKPEILMFVILHPPMQKIFQFSILI*

>peptide 7 (48 aa)
MLVKKQAYCPTPQKQTDPARKCMRRRNKALIPCLLLRVLSIPSQSIPG*

>peptide 8 (45 aa)
MKVFATHTEKGYLCCRPLMTSSKTRSRGTCQERFVTFPMVFERFQ*

>peptide 9 (42 aa)
MTTVIISYYHTVVTFEFFTCTYNYSSSYFCLIFLEAFWALLL*

>peptide 10 (33 aa)
MGVPGAPHLVILLLIPLRPKCLAFTSERPLTLR*

>peptide 11 (56 aa)
MVVYQPPVLELPVPIGAYRSVNGFVCIATSVVLLVSRMEKKYLLSGNMLNQKFLCS*

>peptide 12 (52 aa)
MLTRAGARFLGSPFPPRSRPGWPASGSGNSPVPWSKKGWLDAGSTPRGAVRT*

>peptide 13 (54 aa)
MCSSRRLTNRLGHQTTCARPFCLALNGMALLVTLCPDLSPHVRFYLPATRPTQH*

Sequence

>CNT30688027
TGCAACTTATCCTTTTGGAGTTGACGTAACAAACTACGCGAGCCTCCCGATGAAGCCAACAGAAATCCTATCCGAATACTAAAAATAAAAGGCAATTTCA
TTATGGTGGTATACCAGCCGCCAGTTCTGGAACTTCCAGTTCCAATCGGAGCATATAGATCCGTAAATGGATTTGTATGTATAGCCACTTCAGTCGTGCT
CCTCGTTTCTCGAATGGAAAAAAAGTATCTTCTTTCTGGGAACATGCTAAACCAGAAATTCTTATGTTCGTGATTCTTCATCCACCGATGCAGAAAATCT
TCCAGTTTTCCATTCTCATATGAGGCAGGAAAGTTTATGGGCAACAGGTCGGCACGAAGTGATTCATCATGTTCAAACATGAACCTTTCGCTCGTTGGGG
ACGGTTTATAAATCATCAAATTCCCACAAATGGAATGAGAAGTGGGTCCATGTAAATGATCGAGACCTCGCAAACAACAACGTTCCTTCCCCATATGGAG
TTCGGGACCCAAGGGCAATCGTTGAGTGAACTGTATCTTATTCGTATTAGTTGACCTAAGCCGCACCATTATTGCAGGGGTGGGGCTCGGCCTCCGAACC
GTACGTGGGACGAGTTTCTGCCTCATACAGCTCGGGCCGAAGACCGGGGAAGTTGAGGAGAGATGGGGAGACCCAACTGCTGCCGGTCGGGACGGACAGG
AAAGGGGGCGGGGATATGCTTGTGAAGAAGCAAGCTTATTGCCCCACCCCCCAAAAACAAACCGACCCAGCAAGAAAATGTATGCGCAGGCGCAACAAAG
CGCTCATCCCTTGCTTGCTGCTTCGCGTTCTTTCTATTCCATCCCAGTCCATTCCGGGATAGGCGGCTAATATAATATGTGCAGTAGTCGTCGTCTGACC
AATCGGCTCGGACACCAGACCACTTGTGCCCGCCCATTCTGTCTCGCCCTAAATGGAATGGCTCTCTTAGTTACGCTGTGCCCTGACCTGAGTCCCCACG
TCCGCTTTTATCTGCCCGCAACCCGGCCAACACAACATTAGGGCCGTCCCCCCATTCTATGCTGACCCGGGCCGGGGCTCGCTTTTTGGGAAGCCCGTTC
CCACCGCGCTCACGGCCCGGCTGGCCTGCCAGCGGTAGTGGGAATTCTCCCGTTCCCTGGTCAAAAAAGGGTTGGTTGGATGCGGGATCTACTCCACGAG
GAGCGGTACGGACGTAGATGATATCATCACGACCTCTCTTTGCGTACCGCTAGGGATGCTTAACGCCACTTCGCCAACTGGCATTACCTGCGCTTTCGTG
TCTCTCAGTGTGGTCAGCACTGGGTGTTTCCGAGCAGTGAGGCTTACACCCATTCGCATTAATTCATCCAAAGTTCCTTACCCTTATGCACGAATTTTGG
AATAAGCCATCTTCCTATCAAGGTTAAGGAGTCAACTGAGCATCTCAGCGGCGGGATTGAATACCCGGATCGAATCAGAGTTCACGCCGCCCGCCCTGAA
CAAATAGAATAGGAGGCGTGGGCCACAGGTCGCACATAAGCCATCGGGTCGCACGACAGAAGAACACCCAACATAAAGATGCACACTCCTCCATGTGAAA
TAGAAAGATTCATCTTCACTTTTTTGTAGTAGTCGTGACCAACAGCCATCAGCAGTCGGCTCGTTGGTAAGGCGAGAGCTTCAAGCCCGCTTTCTGGTGG
CACACCCCCCAAACAAGCACCACTCGACGAGGGGGGGGCGGGGAAAGCTACAGGCCCAAAACCTTCGACCCTTCTTTCTATATGGGGGTGCCCGGGGCAC
CTCATCTTGTCATTTTGTTGCTCATTCCCCTTAGGCCGAAGTGTTTGGCCTTTACTTCGGAGCGCCCGCTCACGCTTCGCTGACCTATCGCGTGGTAAAG
AGAAGAGAGTACGAAAGAATTGTAAACAGAGCAGACCGCAGAAAGATTCTAAATATGACAAGTCCCCCATGGATTCGATAATAAGGAAATGAAGAACGGG
AACGAAACGAAATAAAGCATTTCTAGCGGATGAGCTTCTCTCCATTTTGTCTGGTAATAGAATAGGGCGGCTTGCTTTGACCAACACTCCACTTTTTGCT
CTGTCCATGGAGCGTATGAATTTCCTTAAATGTAGATAGACCAAAAAAGGGAATAAAGGGATAGGAATAGGAATTATAGTACCATTGGAAGAAGAGGCAC
CAGTGGGAACATCTCTACTGACGAACCATTTCAATAGTACGGGTGCTGCCGTGCCACGGGGCACGACCATGGAAGTAATGAAAAAGAAGAAGTTCTGTAG
TTGGACCATCTGCTCTATCCGTTCGATTTGAGCTTCTCCAGAGAAGATGAGACGCTAAAAATGAAAGTGTTCGCAACGCATACCGAAAAAGGGTACCTAT
GTTGCCGACCATTAATGACTAGTTCGAAGACCAGGAGCAGGGGCACGTGCCAAGAAAGATTTGTTACTTTCCCTATGGTTTTCGAACGTTTTCAATAAAA
CCTTCTCGTAGAAGTATTTTCACAAAGTTTTCGGTAATATTAGTAGATGCTATTCGAACCCTTCCTTTTATTAAGATTCGAATTCTTATTCTTATTATTA
TCTAATTATTCTTTTTTTTCATGTATATGCGTCAGACACAATCTACTAATTGATCTATATTCTGATACCCTACTATATCATAGTCTCTACTACTAGTATT
TTTAATACCTCAGGAGCTCATGAGACTCTTTGAGTGAAATTCATAAGTCTCAATTCCCGAGCGATCGCACCAAAAACTCGAGTTCCTTTTGGATTTCCTT
CTTGATCAATGACAACCGTCATCATATCGTATTATCATACCGTTGTCACGTTTGAGTTCTTTACATGTACGTACAATTACAGCTCGTCTTACTTCTGTCT
GATCTTTCTAGAGGCATTTTGGGCACTGCTTCTTTGATTACAGCAACAATAACGTCACCAATATGAGCATATCAGTGATTACCAGCTCCTAAGATTCGAA
TACATATCAATTCGATAGCCCCACTCCGTTGTTATCCGCTACATTCAAAAGGGGTCTGAGTGAGATGGATCTTGGAAGTCTGGTTTTTGATTGGATAGTG
ATCTCGGGCACGAGTGGTTGATCTTCGCGGGCCGTGAATGGCCATGGAAAGGAGTATTGATGTCAATATGTTCGATCGAGAAGATTGGACGATGAAAGAC
GGATCCTTTGTGGTTT