Detailed information on CNT30687939


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637323Triticum urartuCapsicum annuum35.379.8490.65139forward
CNT3098505Triticum urartuSolanum tuberosum38.1715.2994150reverse complement
CNT30323793Triticum urartuAsparagus officinalis43.7754.4397.67172forward
CNT30151602Triticum urartuBrachypodium distachyon43.7734.3398.84172reverse complement
CNT30726123Triticum urartuLupinus angustifolius31.043.6896.72122forward

Expression of CNT30687939

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MTSSPHGPYGLGHTRATMAMTMGSKAVRR

>peptide 2 (31 aa)
MTGLEEEAPANSVPAAAVRRGGASVLRNDWA*

Sequence

>CNT30687939
GGGGGCAGCAGTGGGGGATCTTGGATAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTTCGTCG
AGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGGCAAGTGTTCTTCGGAATGACTG
GGCGTAAAGGGCACTGGTAATAGTACGCGCCCCACTCCGAAACAAAGAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGAGATACTGGAGGAAG
GTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATGACAATGGGAAGCAAGGCTGTTAGGAGG