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Detailed information on CNT30687833


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575628Triticum urartuOryza barthii13.1823.9794.2970reverse complement

Expression of CNT30687833

Peptides detected in this lncRNA

>peptide 1 (41 aa)
AYDSFIICGRFLSRSMPFFNGLEERNFPFLSMESQSQPRSW*

>peptide 2 (87 aa)
HMIVLLSVDDFFLVQCPFSMVSKREISHFYLWSHSHNRGRGKSMNLIRFVRFPFIFLRFLILYSAIPTNIFLVLLIFILSYFPSCAK*

Sequence

>CNT30687833
GGCATATGATAGTTTTATTATCTGTGGACGATTTCTTTCTCGTTCAATGCCCTTTTTCAATGGTCTCGAAGAGAGAAATTTCCCATTTTTATCTATGGAG
TCACAGTCACAACCGAGGTCGTGGTAAATCCATGAATTTGATTCGATTTGTGAGATTCCCCTTTATTTTTTTGCGTTTCTTAATTTTGTATTCCGCTATT
CCGACGAATATTTTTTTAGTCTTGCTTATCTTTATCTTATCTTATTTTCCTAGTTGTGCTAAGTAATGTGCGCGGTACAAAGTTCCTGGTAGGGAACTCC
GGGAAGATACAATAAATTAAGATTAAGTGGTAGGAATCAACGAGCTGGATTACTTTCTTTATAATATATATAGGTCTGGCCCTTTCGAATTCGAATAAAA
CATCAACAATCGGAACTTAAGTTCCGAAAAAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGGATTCGAATTAGCGCCGCCCGATCGTA
TTTCCCCTGAGTTAAAAGAAAAGATAGGAAA