Detailed information on CNT30687812


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524319Triticum urartuSetaria italica20.274.9891.1145forward
CNT30301196Triticum urartuTriticum aestivum75.6816.9488.1168forward
CNT30224319Triticum urartuHordeum vulgare61.715.3385.4137forward
CNT30392703Triticum urartuTriticum turgidum100.4512.2989.24223forward
CNT30440859Triticum urartuAegilops tauschii99.5561.7398.19221forward
CNT30667627Triticum urartuTriticum dicoccoides54.540.8893.39121forward
CNT30721707Triticum urartuTriticum spelta46.857.3989.42104reverse complement
CNT30366487Triticum urartuSorghum bicolor20.2710.5193.3345forward
CNT30578976Triticum urartuEchinochloa crusgalli37.846.6189.2984forward
CNT30498933Triticum urartuDigitaria exilis28.834.7187.564forward

Expression of CNT30687812

Peptides detected in this lncRNA

>peptide 1 (39 aa)
VRLISLPFEPNGSNGPLTRALIGGAQPNHGWWGPVTRAI*

Sequence

>CNT30687812
GTTAGGTTGATCTCTCTCCCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGGCC
CTGTGACCCGCGCTATATAAACAGAGGTGGGGGCCGGGGCACGACTTACGAGATTAATCGCTGCCACAATCCCCACCGACACTCCCTACCGATCTAGGGT
TAGCGCGGTGCTCACGGGAAGC