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Detailed information on CNT30687810


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 7e-45

BLAST vs NONCODE:
NONSTUT000620, E-value = 9e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397916Triticum urartuTriticum turgidum77.7978.9799.171198forward

Expression of CNT30687810

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYKADRSRLSYSTGISAVRQTIDEPDGHHATKMKLQQR*

>peptide 2 (40 aa)
ARQTILWIEFRAHLILSSSKLLHTSRSLQIQTITLHHSTV*

Sequence

>CNT30687810
GGCAAGACAAACAATATTATGGATTGAATTCAGGGCTCACTTAATATTAAGTTCATCAAAGCTGCTGCACACCAGCAGAAGTTTGCAGATACAAACGATA
ACACTGCATCATAGTACGGTATAGAAACAAAGACAGTTCAGGCAACGACAGACATAGACCAGACTCCTTTGGAGGACACCGAAGACGAGACTTGTGAACC
CAGAGACAAAAAGCAGCTCCATGGCCAGGAGCTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCCGCCA
AGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAAT
GGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACAAAGCAGACAGAAGCAGATTAAGT
TACAGTACAGGGATATCTGCAGTACGTCAAACAATAGATGAACCAGATGGCCACCATGCTACAAAGATGAAATTGCAACAGAGATGAAATCAGCTAGAGA
GCTGACAGCAAACTGCCCAGGAGCTGGCCACTAGAACAAGCCAATGGATTGACATAATATAAGAGTGTTTTTGACACTATACTAGTATCAAAAACGCTGC
TATATTATGGGACGGAGGGAATAGCATATCTACCAGCGCAGTTTCAATGGGAGCTGATGTAATCTGGTTGTACTGAGAAGCTTGTCAACAAGCCTAGAAA
CCAACAGTAATATCGGCAAACCGACATGAATTTAAGAGTTGAATTCAATGCCCAACTACGGACGCTACAAGCAACTACAAAGCTGAACTATTAATCTAGC
AAATCATAGGTGTATCCTTCCACAGATCATAGGGCTACAAAATCAGAAACTAGCTAACTAAGTCTATAACGAGATAGATGAACCGAACCAACAGCAATCG
CATCGCATCCCAGTAATACCACGAAGGTGTACCCTTCAACATATGAGGCTCATGAGCGGTACATAATCAAAAATCCACAATAACAACCAAGCAGAACTAA
GACGAACCGACCCCACAGCAATCCCATCATAATCGGCAGATCTGCTCGAAAATCACGGCATAATCAAGAGAGACGTGTTAACTACAATCAGGCCTAATCA
GCCACGACTAACCGAACGAGCTGCAATCGATCAACAGCAATAACGCCTCGACCCACCCACAGATCTAATCCAAATCCATACGACTAGCAGGAATCGAGGG
CGGTGCTAGCAACGATCGATCCAAGGGCACGCACGCACGCACGAGAGAGCGAAGAAGAAACCGTAGCCTCGCATACCTTGAGGAGGAGGACGAGAGAGCC
TTCGCTTCGCTCGGATCGGAGGTTTCCCGGTGAGATCGTAGGGGGGCTGGATTGGATTGGATCGGATCGGATGTGTGGAGAGGAGACGGGAGGGGGCGGG
GATTTTATAGCCGAGCCGGCTCGGACGGGAGGGAGAGAAG