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Detailed information on CNT30687584


BLAST search results

BLAST vs Swiss-Prot:
sp|P04782|CB24_PETSP, E-value = 6e-85

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443381Triticum urartuAegilops tauschii77.1948.2496.57467forward

Expression of CNT30687584

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGKHCKAAVLDLLHLELGKRLWVVS*

>peptide 2 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (44 aa)
MDQARVTEVVEVEHTVGAVPGAVGGRHCCRMEQSKLLMCGCRCY*

Sequence

>CNT30687584
GTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTT
GCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATG
GCCTGCACAAAGTATCCAAACATGGAAAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGGTCGTCAGCTAGGC
CAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCGACAGCGCCCATGAGCACGAC
CTGGCAAGCCCAGATGGCAAGGATGCTCTGAGCATGGACCAAGCTAGGGTTACCGAGGTAGTCGAGGTAGAGCACACGGTCGGGGCCGTACCAGGGGCTG
TTGGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGGTGGCTGCGTGAGGAAGAGAGGGGCAAGG
GAGGG