Detailed information on CNT30687569


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671247Triticum urartuSetaria viridis66.3276.697.851349forward
CNT3094424Triticum urartuSolanum tuberosum5.3140.693.52108reverse complement
CNT30226708Triticum urartuHordeum vulgare64.598.0699.921312forward
CNT30259423Triticum urartuBrassica rapa17.5524.3992.16357forward
CNT30207585Triticum urartuHelianthus annuus16.7698.2791.5341forward
CNT30627167Triticum urartuDaucus carota25.8647.9192.4526forward

Expression of CNT30687569

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MLFTLPTMRALLSWGALKLASFPYFSWSSIRRPILNRTDLIFTTRGISCFCRILPIS*

>peptide 2 (72 aa)
MAKFLLKPSLPLNSAFGVNPAASMRKAAQRRLEGLLRKAARAAEGGKTKGVFWSPLRLGVLVGGVCHDETRE*

>peptide 3 (42 aa)
MKGRFALDALYPPHYEGSVVLGSVEACFFSILFLVINTTTYS*

>peptide 4 (49 aa)
MKEKGLRIRKTKEAWRADYKTTTTIQAMSDSEAFSLFFFFSKAPQLAIL*

>peptide 5 (88 aa)
MPADQFTMSLSLTLVKEATWIGLGLLRLMRPRSRSLRSIFLIGASICMGNSLLKDPAQCPLPSPAAFRPKGVYNFFFRTLMPDRETAC*

>peptide 6 (95 aa)
MAERRWQAVIWIRCFTRRRFSSSRKNCMGVVLGGTSRMTVPGNSTVLRAAMVVDPAEPTQRFRPDCRKWVIRFCISMRRNTAPTIPSSKSSAYRA*

Sequence

>CNT30687569
ATTGATTGATTCAAGGTAGCTTTAGCCATTGTGGGTAGAAGCTAGTCGCCAGAAGCGAAGCAGCGATCTTCCGGGCCGGAAAGGTTCTATTTTTCTGACG
CGTAAGCTACCGCAAAATGAATGAAGGAAAAAGGCCTCAGGATTAGAAAGACTAAAGAGGCATGGAGGGCCGACTACAAGACTACGACTACAATACAAGC
CATGAGCGATAGCGAAGCCTTCAGCCTTTTTTTTTTTTTTTCGAAAGCCCCACAACTAGCTATCTTATAGCAGATAAGGCAAGCCTACTCAACTAATCTC
ATGTAAACGCCTGTTCGCTAAAATCCAAATAGAAAAAGACAACTACTTATTAAACATGTAGTTGAGTGCTCCGTCGTTGTTCGGATCTTGACCGAGTCCG
AGCTTCCCAAGCTCTATGCTGTTTGGGAACTCAGCAAGGGTCTTACCACCTTCTTGATTGACTATATTTGAGTCTTTGGGGTACTTTAGGATTATATTCC
GCGCCGAAGATTTGTGCTTGTGGGCTAGGGTGAATATAGCGGACCAGCGGATCTGGTAGTTGACAATCGTTCGGACTTGGTAAAGGTTGTCGCAGCACCT
GTAGTAGGACAGAGGACTTATCGCGATGCCCGCGGACCAATTTACTATGTCTCTGTCGCTGACGTTGGTCAAAGAGGCCACGTGGATTGGCCTGGGTCTT
CTTCGGCTAATGAGACCTCGATCCCGAAGCCTTCGGAGTATCTTTTTGATAGGCGCCTCTATCTGTATGGGGAATTCGCTGCTGAAAGATCCCGCCCAGT
GTCCCCTTCCTTCCCCCGCCGCCTTCCGACCAAAGGGAGTATACAATTTCTTCTTCAGGACACTCATGCCCGATCGTGAGACTGCCTGTTGAACGCCTGA
TGGCACCTTGCTCTGACCTGAGCTATGCAACAACGAGATCCCCCTCGATCTTTGCCGGATGTGCTTGACGGTCCCCCATAATACGCTAACTTGGGGACTT
TTTAGTCCATCTTTTCCAAGAGTCTCCGCTAGTTGAACCGCGTCCAGTAGACGACCTCTTCCGCTCATCCCCTTCGTCAGCTCTTTGATAGGGATACTAT
AACCTAGGTCCCTAAACTTGGAATGGATGGCGGAGCGTAGGTGGCAGGCAGTTATATGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAA
GAATTGTATGGGAGTCGTCCTCGGGGGGACTTCCCGAATGACCGTACCGGGGAATTCTACCGTACTCCGTGCAGCTATGGTTGTTGATCCTGCGGAGCCT
ACCCAAAGGTTCAGACCGGATTGTAGGAAGTGGGTGATACGTTTTTGTATTTCTATGAGAAGAAATACGGCACCCACGATTCCCAGTAGTAAGTCGTCGG
CATATCGCGCGTAACAAATCCTTATTAATAAGGAATGGCTTTTAAAGGGGGCCAGCTTACGGGCCAGGCCTCTCTCTGACCTGATAACTAGTATCGCCTC
CCCGCCCAGCTCTATCAGCAGGCCCCTTCTTTTGCAATACTTAAGAAGGTCTCTCATGGCCAAATTCTTATTAAAGCCTTCTCTACCATTGAATTCGGCC
TTCGGGGTCAACCCAGCGGCTTCTATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGGCTAGGGCCGCTGAAGGGGGGAAAACGA
AAGGCGTTTTCTGGTCTCCCCTTCGCCTGGGGGTGCTTGTGGGGGGGGTGTGCCACGACGAAACAAGGGAATGAAAGGTCGCTTTGCGTTGGATGCTCTT
TACCCTCCCCACTATGAGGGCTCTGTTGTCTTGGGGAGCGTTGAAGCTTGCTTCTTTTCCATACTTTTCTTGGTCATCAATACGACGACCTATTCTTAAT
AGAACCGATCTTATTTTCACTACAAGAGGAATTTCGTGCTTCTGCCGGATCCTCCCTATCTCCTGATCGAGCTTGTGTAGGTAGATATTGCCTGGTAGGG
CCGATAGTAGTACACTGTTTGGGATGGAGTCAGG