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Detailed information on CNT30687498


BLAST search results

BLAST vs Swiss-Prot:
sp|P25414|RBL_AEGTA, E-value = 0.0

BLAST vs NONCODE:
NONORUT000578, E-value = 2e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225281Triticum urartuHordeum vulgare23.7896.4298.14323forward
CNT30434683Triticum urartuAegilops tauschii33.1475.6399.33450forward
CNT30257373Triticum urartuAvena sativa47.4296.9998.14644forward
CNT30606537Triticum urartuGossypium raimondii40.832.9681.95554forward
CNT30595572Triticum urartuOryza meridionalis28.6545.3995.37389forward
CNT3058691Triticum urartuAmborella trichopoda24.373.8387.27330forward
CNT30100001Triticum urartuOryza rufipogon18.6398.0698.02253forward

Expression of CNT30687498

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIILCNDQDW*

Sequence

>CNT30687498
TCATGATCATATCATGATCTATTTTTATTCGGCTCAATCTTTTTTTTCTAAAAAAGATTGAGCCGAGTTTAATTGCAATCAATTAGAAGAATAAAGAAGA
ATTACTGCATTTCATAACTGATTTTTTTCTCTTTTTATTTCGTTTCTTTTTTATTTATACCTTCTTTATCTTTAGTTTTATCTAGTTAATCAATAGTATC
TACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTC
GCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCC
CAAAGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGAT
ACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCG
GAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCAC
GGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAAC
CCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGT
GATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCAC
CACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGACGACCGTACTTGTTCAACTTATCTCTTTCAACTTGGATACC
ATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACA
ATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGA
TGTGATAGCATCATCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACATC