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Detailed information on CNT30687283


BLAST search results

BLAST vs Swiss-Prot:
sp|P14852|COX3_ORYSI, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534827Triticum urartuEucalyptus grandis11.1543.8289.57163forward
CNT30222097Triticum urartuHordeum vulgare11.9730.0796175forward
CNT3081767Triticum urartuBrassica juncea5.7522.1688.184reverse complement
CNT3035080Triticum urartuCucumis melo46.7213.0694.88683forward

Expression of CNT30687283

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPVPCSCFKANVMLLGQMTKILANTTYDQEKSTYNHMKTMKASC*

>peptide 2 (32 aa)
MPHKLVAQALPRRAVYHKIEFEPGAKAPTPPF*

>peptide 3 (43 aa)
MGITEPRLQNASTMQLLQSQRDASWSDDQDIGEYHIRSRKEYL*

>peptide 4 (31 aa)
VLFVFELLFLNPLIRSLLSYTSPPIDRDKWE*

Sequence

>CNT30687283
GTTCTCTTTGTCTTCGAGCTTTTATTCCTCAATCCACTTATTCGTTCCCTTCTTTCATATACCTCCCCACCAATAGATAGAGACAAATGGGAATAACCGA
ACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGCTTCTTGGTCAGATGACCAAGATATTGGCGAATACCACATACGATCA
AGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGGAGGGTGCTTGGTA
ATATTCCATTCCTTGAAAGCCAGTGGATACTAGAGCCAGTGAAACGGTTGCTACTAAAGCGTAAACTGCTCGTTTTTCCTTCCCCGCGAGTATAGCATGA
TGAGCCCAAGTTACGGCAGCTCCGGATGAAGGGAGAATAGGGGTATTAAGAAGAGGGATTTCCCAAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAA
TACCTCCGATCTCTACCGTAGGTGCCAAAGAAGAATGAGAAGAAGCCCAAAAAAAAGCAAAAAGGAACATAACCTCCGAGACTATGAAGAGAATAGAACC
ATATCGAGGTCCTAATTGTACAGCTTTTGTATGATGCCCTTCCAACGTGGATTCACGTAGAACATCCCGCCACCATACGAACATGGTATAAAGGAGAAAT
ATTAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCTCCGAGTGAACCCGAAATAG
GCCATGGACTTGGATCTACCAAATGATAAGAATGCCTCTGAGATTCAATCATAAACCACTTTGCCCCGGTTGTATGTAAACCCCCCTTCACCCCCATCCC
CTAAAGTGGTAAAGAAGGAGGCTCTTTTTTGTCTCATTAGGACAAACAAATAGGAAGGGATAGTTCTTTCATTGCATTGATAGAAGTGAGACTATCAAAA
GATCTCTCTATTATTTAGAGAAAAGAGTTGGCGTGGGTTCTACCAACGAAACGAAGAAGTTTTGGATTGGTTTTTATCATTCGGAACCCTCTCCGTATTA
GTAAGAAAAACACACCCAGACTCTTACTTCAATGGTGGGAACAACCTCAGCGGCGTGAACATGAACAATCATTCTATGCAAAATTTCATGTTAGGAAGAA
TAAGAAGAATCTCATTCATGTGTTCATGCTAACAGAAGAGCGGATCCAATACACATAAGACTTTTTGTCAGGAAATTCCTAATGTAAATGATGAATTTGG
GATGTCATGCCCCACAAGTTAGTTGCCCAAGCGCTCCCTAGGAGGGCAGTCTACCACAAGATAGAGTTTGAGCCTGGAGCCAAAGCCCCAACCCCTCCAT
TTTAGGTTTTTATCTGGAAAGAATTTCAGGAAGTCATATCGGCCAGATAAGCCTCTGACGGC