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Detailed information on CNT30687109


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H50|RK16_WHEAT, E-value = 6e-91

BLAST vs NONCODE:
NONOSAT001021, E-value = 7e-130

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550215Triticum urartuIpomoea triloba22.033.9786.26182forward

Expression of CNT30687109

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MIYQFSLNLIERGIISSFAGISGKKSLVIFYSINGQ

>peptide 2 (30 aa)
ARITSDLSRGIWGNASLITATITSPIRAYR*

Sequence

>CNT30687109
GCTCGAATTACTTCGGATCTTTCTAGAGGCATTTGGGGCAATGCGTCTTTGATTACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCAG
CAGCTCCTATGACTCGAATACACATCAATTTTCGAGCTCCACTATTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTATTTTGATTTCAATT
TGTTATTTCAATGCAAAAGGATGAAAGAAATATTGTCTTTCCAGAAAGAAAAACCGGGCATTTTTTTTATCTTCCATACCCCTTTTAGGGTTCTATATCT
CTAATCGAATAAATTGACTTCGTATGGGCATTTTACTGGCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCAGATACTCCCCCCATTTCATAAAGTAT
ACGACCAGGTTTAACAACGGATACCCAATATTCGGGGGACCCCTTTCCCGAGCCCATACGTGTTTCCGTGGGTCTTAGTGTAACCGGTTTGTCGGGAAAT
ATACGTACGCATATTTTTCCACCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCCGTGATCCAAGCGGGTTCAAGTGCTT
GAAGAGCATATCTACCAAAACAAATACGATTGCCTCGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGGGAAATCTGGTTCTTTTGGGGTTATA
CATAGCAATTATATTAAATGATTTATCAATTTTCATTAAATCTTATAGAAAGAGGTATAATTTCTTCTTTTGCAGGGATTTCAGGAAAAAAGTCTCTTGT
CATTTTTTATTCTATCAATGGACAGA