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Detailed information on CNT30686961


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB23|METK2_HORVU, E-value = 3e-180

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521128Triticum urartuSetaria italica41.8749.5985.12363forward
CNT30158121Triticum urartuPistacia vera56.8678.8880.12493forward
CNT30190429Triticum urartuSecale cereale30.856.2197.38267forward
CNT30667060Triticum urartuTriticum dicoccoides36.4549.76100316forward
CNT3066706Triticum urartuLeersia perrieri20.7652.9487.22180forward
CNT30355133Triticum urartuLactuca sativa22.3822.1780.93194forward
CNT30420528Triticum urartuPapaver somniferum23.9910.9183.65208forward
CNT30594307Triticum urartuEragrostis curvula9.824.2285.8885forward

Expression of CNT30686961

Peptides detected in this lncRNA

>peptide 1 (97 aa)
MTKRPDGFRWKMVFSSRSAAISSLVTVSSCCVEMRTVCTRTGTMAPPSFRYSMVTWVFPSGLSQAQVPFLRTSVRRAPSLVASMWVRGISSGVSSVA*

Sequence

>CNT30686961
AGGCAGCAGACCAAGAATAACCCCAATGTGATTTCTTGTTCTTAGGCAGATGTCTTGTCGAACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCGGCAT
CATCGCGGCCAAAGTGACCGTAAGCAGCGGTCTTGATGAACCTGTTTCCACCTTTCTTCAAGTCCAGCTTGAGGATCTCCCTGTCGGGGATCTTGCCGGT
GCCGTAGGAGTCGACGAACACAGACAGGGGCTCAGGCACCCCAATGGCGTATGAGATCTGCACAATGCAGCGGCGTGCGAGACCACTGGCGATGATGCTC
TTGGCAGCCTGCCTGGCAATGTAGGCACCACTGCGGTCGACCTTGGTCGGGTCCTTGCCAGAGAAGGCGCCGCCGCCGTGGGCTCCCCAGCCACCGTAGG
TGTCGATGATGATCTTGCGGCCGGTGAGACCGGCATCACCGTGAGGTCCGCCGATGACGAAGCGGCCAGACGGGTTCAGGTGGAAGATGGTGTTCTCATC
GAGGTCTGCGGCTATCTCGTCGTTGGTGACGGTCTCGTCATGCTGTGTGGAGATGAGGACGGTGTGCACACGAACAGGCACCATGGCACCACCCTCGTTT
AGGTACTCAATGGTGACCTGGGTCTTTCCGTCAGGCCTGAGCCAGGCGCAGGTGCCATTCTTGCGGACCTCGGTAAGGCGAGCTCCAAGCTTGGTGGCGA
GCATGTGGGTGAGGGGCATCAGCTCAGGAGTCTCATCGGTGGCGTAGCCGAACATGATGCCCTGGTCACCGGCACCGATCTCTTCAGGGCGCTTGGTGAA
GTGTCCGTGAACACCCTGGGCAATGTCAGGGGATTGCTGCTCGATGTTGACGAGCACCTTGCAATGG