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Detailed information on CNT3068683


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Quercus suberSetaria italica44.3129.0783.49218forward
CNT30530404Quercus suberEucalyptus grandis66.8792.6882.98329forward
CNT30316147Quercus suberCorylus avellana89.4359.0687.5440forward
CNT30703138Quercus suberQuercus lobata95.3389.598.29469forward
CNT30499549Quercus suberCoffea canephora81.381.6382.5400forward
CNT30615836Quercus suberSesamum indicum61.3878.8581.79302forward
CNT30268105Quercus suberChenopodium quinoa73.5843.1581.49362forward
CNT3021247Quercus suberCitrullus lanatus82.1143.8782.18404forward
CNT30729539Quercus suberCorchorus capsularis86.9963.6981.54428forward
CNT30524728Quercus suberPhaseolus vulgaris82.327582.72405forward
CNT30486152Quercus suberOlea europaea77.4442.185.3381forward
CNT30506399Quercus suberNicotiana attenuata55.4982.4884.98273forward
CNT30636701Quercus suberCapsicum annuum55.8966.9178.55275forward
CNT3091042Quercus suberSolanum tuberosum48.7865.7580.42240forward
CNT30182233Quercus suberSecale cereale68.754.3481.66338forward
CNT30289293Quercus suberTriticum aestivum23.9838.8285.59118forward
CNT30223417Quercus suberHordeum vulgare42.4892.0785.65209forward
CNT30590847Quercus suberMusa acuminata41.2644.4285.22203forward
CNT3084565Quercus suberVigna radiata82.3223.9683.7405forward
CNT30539234Quercus suberBrassica napus81.7143.9383.33402forward
CNT30511842Quercus suberSolanum lycopersicum61.5966.1679.87303forward
CNT30143836Quercus suberMedicago truncatula88.4174.6181.38435forward
CNT30244810Quercus suberAvena sativa59.3536.1480.48292forward
CNT30261302Quercus suberBrassica rapa80.2876.483.04395forward
CNT30457070Quercus suberSaccharum spontaneum80.8958.4480.65398forward
CNT30131528Quercus suberLolium perenne60.9865.0882300forward
CNT30231964Quercus suberAnanas comosus36.5914.7582.22180forward
CNT3066796Quercus suberLeersia perrieri58.3373.7882.23287forward
CNT30653881Quercus suberRosa chinensis82.1137.8384.41404forward
CNT30713695Quercus suberMalus domestica golden41.2645.0188.18203forward
CNT30339698Quercus suberEragrostis tef58.1323.1683.57286forward
CNT30477892Quercus suberArabidopsis halleri76.6335.2383.55377forward
CNT30363710Quercus suberSorghum bicolor46.5439.0182.53229forward
CNT30595456Quercus suberOryza meridionalis71.1461.482.57350forward
CNT30360575Quercus suberLactuca sativa64.4352.5785.49317forward
CNT30411763Quercus suberPapaver somniferum44.5119.4381.28219forward
CNT30570592Quercus suberVitis vinifera45.7369.6687.11225forward
CNT30645151Quercus suberCannabis sativa79.0740.8280.72389forward
CNT3055709Quercus suberAmborella trichopoda65.0448.9381.88320forward
CNT30105598Quercus suberOryza longistaminata80.4957.4781.31396forward
CNT30319856Quercus suberAsparagus officinalis42.0773.9383.57207forward
CNT30574680Quercus suberOryza barthii73.7839.6380.72363forward
CNT30580197Quercus suberEchinochloa crusgalli81.7148.7980.85402forward
CNT30497454Quercus suberDigitaria exilis63.8284.4181.85314forward
CNT30115589Quercus suberOryza nivara73.7825.4480.72363forward
CNT30594668Quercus suberEragrostis curvula54.4779.5381.34268forward
CNT30603506Quercus suberOryza punctata72.1570.7282.25355forward
CNT30174824Quercus suberVigna angularis63.2132.7480.71311forward
CNT30550386Quercus suberOryza brachyantha30.2854.1885.91149forward
CNT30332943Quercus suberCynara cardunculus69.5165.6482.46342forward
CNT30726386Quercus suberLupinus angustifolius44.5124.3683.11219forward
CNT3064271Quercus suberSelaginella moellendorffii55.2849.4580.51272forward
CNT3050773Quercus suberCucumis sativus43.0937.7283.96212forward

Expression of CNT3068683

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MVDLIDLEQERLDDVVSDELEPWVAEMVHHVLFPPGEEVIDHDHAIASLHQTVDQVGPDEPGPAGHHDPQTLAF*

>peptide 2 (77 aa)
MSSNLGLPKWCITFSFLPVKKLSTTITLSPRSIRRSTKWDPTNPAPPVTTIRKPLRFSPKGTLPELYMWKAERCSYMG

Sequence

>CNT3068683
ACCAATAGGATTGACGTTTCCCCAATAGGTTTCGACCTGAGGGTGTTGCAGTGGATCTCCGTAAACCTCACTTGTGCTCGTTAGCAAAAACCTCGCACCC
ACTCTCTTCGCAAGTCCCAGCATGTTCAATGTCCCCACAACATTGGATATGATGGTCTTGACGGGGTTGAACTTGTAGTGAACAGGAGAGGCAGGGCAAG
CGAGATGGTAGATCTGATCGACCTCGAGCAAGAGAGGCTCGACGACGTCGTGTCGGATGAGCTCGAACCTTGGGTTGCCGAAATGGTGCATCACGTTCTC
TTTCCTCCCGGTGAAGAAGTTATCGACCACGATCACGCTATCGCCTCGCTCCATCAGACGGTCGACCAAGTGGGACCCGACGAACCCGGCCCCGCCGGTC
ACCACGATCCGCAAACCCTTGCGTTTTAGCCCCAAGGGGACTTTGCCAGAGCTGTACATGTGGAAAGCAGAGCGGTGCTCGTACATGGGTTT