Detailed information on CNT30686626


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 8e-171

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30253260Triticum urartuAvena sativa95.9378.2287.89801forward
CNT30140466Triticum urartuLolium perenne95.9375.0787.27801forward
CNT30722304Triticum urartuTriticum spelta46.5999.2393.06389forward

Expression of CNT30686626

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSNSRFLEKVSGSAESPAVSHP*

>peptide 2 (41 aa)
MVTRASPKRADDDTFFTALLAKVEEERDMVVVAIGRLSKLST

>peptide 3 (38 aa)
MPQGLRPSQEGRSCRLGRVGRRSHRVGRRQRGTPRRHP*

>peptide 4 (46 aa)
QDTLLAGDKVGGKCPCIVVDGVGDVVSEILKWALARDDSLDKEAKH*

>peptide 5 (80 aa)
KTPYLPGTKLVANAHALLLTGSAMWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

Sequence

>CNT30686626
CAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCAAATGCCCATGCATTGTTGTTGACGGGGTCGGCGATGTGGTCAGCGAGATTCTCAAGTGGGCCC
TTGCCCGTGACGATAGCTTGGACAAAGAAGCCAAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAATGCCTCAG
GGTCTTCGGCCAAGCCAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCGGCAACGCGGTACCCCTCGACGGC
ACCCATGAGCACGACCTGACATGCCCAAATAGCCAGGATGCTTTGTGCGTGGACAAGGCTGGGGTTGCCAAGGTAGTCAAGACCACCCTCACTAAAGATT
TGAGAGCCGGCCTTGAACCAAACAGCCTCACCGAACTTAACGCCATTGCGGGCGAGCAACTCAGGGAAGACGCAACCAAGTGCCCCAAGCATGGCCCAAC
GACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCAGGGTCAGCCGAAAGTCCGGCTGTGTCCCACCCATAGTCACCTGGGAACTCACCTGT
CAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGTACAACACACGGTCGGCACCGTACCATGGGCTGTCAGAGGAAACCTGCTTTGCCTTCGCTGCA
GTTTTGCGCATGGTGACGCGGGCCTCGCCGAAGAGAGCCGATGACGACACGTTCTTCACCGCCTTGCTGGCAAAGGTCGAGGAGGAGAGGGACATGGTGG
TGGTTGCCATTGGAAGGCTGAGCAAATTGTCTACT